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Your input: Loc11997(=Akr1b7)
Displaying NW_000273 (+) on chromosome 6 of Mus musculus
Mouse genome, MGSCv3 (Dec 2002)
Extracted fragment: NW_000273 between 3583448 and 3683447 (100000 bp).
Selection of elements to be listed below:
 User Sequence (1) Promoter Region (6)
 PromoterInspector Prediction (0) Transcription Start Site (4)
 Primary Transcript (8) 5'UTR (2)
 Exon (39) Intron (32)
 3'UTR (3) Module (9)
 Repeat Region (19) Variation (4)
 SMAR (0)
 Show all elements for the following transcripts:
AK033773/AK033773
AK052576/AK052576
AK082777/AK082777
Akr1b7/AK002705
Akr1b7/NM_009731
Fgfrp/NM_008012
LOC207207/XM_133077
LOC243750/XM_163099
Start
rel. (abs.)		 End
rel. (abs.)		 Strand Length Type of element Name Annotation Extraction / Analysis
<1
(3583448)		 2210
(3585657)		 + 2210 bp Primary Transcript Fgfrp
NM_008012
Loc14187		 Fibroblast growth factor regulated protein
19678
(3603125)		 20278
(3603725)		 + 601 bp Promoter Region Promoter for gl10090070992 Promoter for transcript(s):
AK082777/AK082777
Analyse Promoter
20178
(3603625)		 58119
(3641566)		 + 37942 bp Primary Transcript AK082777
AK082777
gl10090070992		 Full length cDNA based on cap-trapper method.
24986
(3608433)		 25586
(3609033)		 + 601 bp Promoter Region Promoter for gl10090070927 Promoter for transcript(s):
AK052576/AK052576
Analyse Promoter
25486
(3608933)		 26454
(3609901)		 + 969 bp Primary Transcript AK052576
AK052576
gl10090070927		 Full length cDNA based on cap-trapper method.
31981
(3615428)		 40134
(3623581)		 - 8154 bp Primary Transcript LOC243750
XM_163099
Loc243750		 LOC243750
40034
(3623481)		 40634
(3624081)		 - 601 bp Promoter Region Promoter for Loc243750 Promoter for transcript(s):
LOC243750/XM_163099
Analyse Promoter
47068
(3630515)		 47698
(3631145)		 + 631 bp Promoter Region Promoter for Loc11997 Promoter for transcript(s):
Akr1b7/AK002705
Akr1b7/NM_009731
Analyse Promoter
47568
(3631015)		 58345
(3641792)		 + 10778 bp Primary Transcript Akr1b7
AK002705
Loc11997		 Full length cDNA based on cap-trapper method. Mapped cDNA AK002705 is alternative transcript to NM_009731/Akr1b7 (2/8).
47598
(3631045)		 58350
(3641797)		 + 10753 bp Primary Transcript Akr1b7
NM_009731
Loc11997		 Aldo-keto reductase family 1, member B7
51041
(3634488)		 51641
(3635088)		 + 601 bp Promoter Region Promoter for gl10090070765 Promoter for transcript(s):
AK033773/AK033773
Analyse Promoter
51541
(3634988)		 53860
(3637307)		 + 2320 bp Primary Transcript AK033773
AK033773
gl10090070765		 Full length cDNA based on cap-trapper method.
54265
(3637712)		 54865
(3638312)		 + 601 bp Promoter Region Promoter for Loc207207 Promoter for transcript(s):
LOC207207/XM_133077
Analyse Promoter
54765
(3638212)		 80323
(3663770)		 + 25559 bp Primary Transcript LOC207207
XM_133077
Loc207207		 LOC207207

Extract Sequences
Which matches?
selected matches in above list
all matches
 Extent: match positions ± bp
by sequence: position from to    reverse complement
Sequence format FASTAGENBANK

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