Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1073990370-10474-124920076128.BLASTQ4 Query= vorax50d06_10000_19999 (10000 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,604,661 sequences; 527,787,770 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
RID: 1073990370-10474-124920076128.BLASTQ4
Query= vorax50d06_10000_19999 (10000 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,604,661 sequences; 527,787,770 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Related Structures Score E Sequences producing significant alignments: (bits) Value gi|21397795|ref|NP_653780.1| Flavin_Reduct, Flavin reductas... 147 4e-34 gi|30023353|ref|NP_834984.1| Nitrilotriacetate monooxygenas... 146 7e-34 gi|27468822|ref|NP_765459.1| conserved hypothetical protein... 140 4e-32 gi|15925649|ref|NP_373183.1| conserved hypothetical protein... 129 7e-29 gi|15614841|ref|NP_243144.1| BH2278~unknown conserved prote... 129 9e-29 gi|16080661|ref|NP_391489.1| ywrF [Bacillus subtilis] >gi|1... 128 1e-28 gi|21284308|ref|NP_647396.1| conserved hypothetical protein... 126 6e-28 gi|15606255|ref|NP_213633.1| putative protein [Aquifex aeol... 126 7e-28 gi|34496367|ref|NP_900582.1| conserved hypothetical protein... 121 2e-26 gi|23058082|ref|ZP_00083185.1| COG1853: Conserved protein/d... 117 3e-25 gi|27378442|ref|NP_769971.1| blr3331 [Bradyrhizobium japoni... 117 3e-25 gi|22992538|ref|ZP_00037177.1| COG1853: Conserved protein/d... 115 1e-24 gi|16263358|ref|NP_436151.1| conserved hypothetical protein... 112 1e-23 gi|33600096|ref|NP_887656.1| conserved hypothetical protein... 111 2e-23 gi|22986186|ref|ZP_00031288.1| COG1853: Conserved protein/d... 110 4e-23 gi|22961587|ref|ZP_00009193.1| COG1853: Conserved protein/d... 108 1e-22 gi|27376349|ref|NP_767878.1| blr1238 [Bradyrhizobium japoni... 108 2e-22 gi|11514649|pdb|1EJE|A Chain A, Crystal Structure Of An Fmn... 107 3e-22 gi|15678180|ref|NP_275295.1| conserved protein [Methanother... 107 3e-22 gi|15965181|ref|NP_385534.1| CONSERVED HYPOTHETICAL PROTEIN... 105 2e-21 gi|24372086|ref|NP_716128.1| hypothetical flavoprotein oxyg... 103 5e-21 gi|17546539|ref|NP_519941.1| CONSERVED HYPOTHETICAL PROTEIN... 102 2e-20 gi|15672060|ref|NP_266234.1| hypothetical protein [Lactococ... 101 2e-20 gi|38107230|gb|EAA53431.1| hypothetical protein MG07708.4 [... 101 3e-20 gi|16802803|ref|NP_464288.1| similar to unknown proteins [L... 100 4e-20 gi|40742224|gb|EAA61414.1| hypothetical protein AN7162.2 [A... 99 1e-19 gi|29374996|ref|NP_814149.1| conserved hypothetical protein... 99 1e-19 gi|16799829|ref|NP_470097.1| similar to unknown proteins [L... 98 2e-19 gi|15889046|ref|NP_354727.1| AGR_C_3198p [Agrobacterium tum... 97 4e-19 gi|17938392|ref|NP_535181.1| conserved hypothetical protein... 97 6e-19 gi|32041690|ref|ZP_00139273.1| COG1853: Conserved protein/d... 97 6e-19 gi|15890290|ref|NP_355962.1| AGR_L_355p [Agrobacterium tume... 97 6e-19 gi|16119642|ref|NP_396348.1| AGR_pAT_605p [Agrobacterium tu... 97 6e-19 gi|21284305|ref|NP_647393.1| conserved hypothetical protein... 96 1e-18 gi|15925645|ref|NP_373179.1| conserved hypothetical protein... 96 1e-18 gi|27378509|ref|NP_770038.1| blr3398 [Bradyrhizobium japoni... 96 1e-18 gi|15596841|ref|NP_250335.1| conserved hypothetical protein... 96 1e-18 gi|13471042|ref|NP_102611.1| unknown protein [Mesorhizobium... 95 2e-18 gi|28871435|ref|NP_794054.1| conserved hypothetical protein... 95 2e-18 gi|22985341|ref|ZP_00030462.1| COG1853: Conserved protein/d... 95 2e-18 gi|23059441|ref|ZP_00084409.1| COG1853: Conserved protein/d... 94 3e-18 gi|27377536|ref|NP_769065.1| blr2425 [Bradyrhizobium japoni... 93 9e-18 gi|32470907|ref|NP_863900.1| conserved hypothetical protein... 93 9e-18 gi|26988132|ref|NP_743557.1| conserved hypothetical protein... 92 2e-17 gi|17987202|ref|NP_539836.1| NITRILOTRIACETATE MONOOXYGENAS... 90 6e-17 gi|40746749|gb|EAA65905.1| hypothetical protein AN0876.2 [A... 89 1e-16 gi|39937225|ref|NP_949501.1| conserved hypothetical protein... 89 1e-16 gi|22961350|ref|ZP_00008956.1| COG1853: Conserved protein/d... 89 1e-16 gi|22983855|ref|ZP_00029022.1| COG1853: Conserved protein/d... 89 1e-16 gi|32403418|ref|XP_322322.1| hypothetical protein [Neurospo... 88 2e-16 gi|23501946|ref|NP_698073.1| conserved hypothetical protein... 87 5e-16 gi|22966071|ref|ZP_00013668.1| COG1853: Conserved protein/d... 87 5e-16 gi|15966354|ref|NP_386707.1| CONSERVED HYPOTHETICAL PROTEIN... 84 3e-15 gi|22957519|ref|ZP_00005218.1| COG1853: Conserved protein/d... 80 8e-14 gi|40740386|gb|EAA59576.1| hypothetical protein AN7922.2 [A... 79 1e-13 gi|21241252|ref|NP_640834.1| conserved hypothetical protein... 79 1e-13 gi|20090202|ref|NP_616277.1| Fmn-binding protein [Methanosa... 77 4e-13 gi|21229945|ref|NP_635862.1| conserved hypothetical protein... 76 1e-12 gi|15807567|ref|NP_296304.1| conserved hypothetical protein... 75 2e-12 gi|18203421|sp|Q9RRA9|YP85_DEIRA Hypothetical protein DR2585 75 2e-12 gi|22959663|ref|ZP_00007311.1| COG1853: Conserved protein/d... 75 3e-12 gi|23050581|ref|ZP_00077463.1| COG1853: Conserved protein/d... 74 6e-12 gi|23006840|ref|ZP_00048977.1| COG1853: Conserved protein/d... 73 7e-12 gi|27469154|ref|NP_765791.1| conserved hypothetical protein... 72 2e-11 gi|32267306|ref|NP_861338.1| conserved hypothetical protein... 72 2e-11 gi|15678602|ref|NP_275717.1| conserved protein [Methanother... 69 1e-10 gi|21229390|ref|NP_635312.1| conserved protein [Methanosarc... 68 2e-10 gi|20092136|ref|NP_618211.1| conserved hypothetical protein... 65 2e-09 gi|15616546|ref|NP_244852.1| BH3984~unknown conserved prote... 62 1e-08 gi|23135975|ref|ZP_00117706.1| COG1853: Conserved protein/d... 59 1e-07 gi|20091133|ref|NP_617208.1| flavoredoxin Flr [Methanosarci... 58 2e-07 gi|21229018|ref|NP_634940.1| flavoredoxin [Methanosarcina m... 57 7e-07 gi|16082413|ref|NP_394898.1| conserved hypothetical protein... 56 1e-06 gi|23048756|ref|ZP_00076178.1| COG1853: Conserved protein/d... 54 4e-06 gi|23021196|ref|ZP_00060880.1| COG1853: Conserved protein/d... 52 2e-05 gi|16077605|ref|NP_388419.1| ydfE [Bacillus subtilis] >gi|7... 49 2e-04 gi|40741327|gb|EAA60517.1| hypothetical protein AN4356.2 [A... 48 3e-04 gi|39995369|ref|NP_951320.1| flavoredoxin [Geobacter sulfur... 47 7e-04 gi|23053429|ref|ZP_00079638.1| COG1853: Conserved protein/d... 47 7e-04 gi|21227048|ref|NP_632970.1| putative NADPH-flavin oxidored... 46 0.001 gi|20092760|ref|NP_618835.1| flavoredoxin [Methanosarcina a... 45 0.002 gi|23054870|ref|ZP_00081007.1| COG1853: Conserved protein/d... 44 0.004 gi|15612955|ref|NP_241258.1| BH0392~unknown conserved prote... 44 0.006 gi|18203185|sp|Q9KIT1|FLR_DESGI Flavoredoxin >gi|11356328|p... 43 0.011 gi|14590716|ref|NP_142786.1| hypothetical protein PH0856 [P... 42 0.024 gi|23056696|ref|ZP_00082581.1| COG1853: Conserved protein/d... 41 0.031 gi|21232632|ref|NP_638549.1| conserved hypothetical protein... 41 0.031 gi|18976974|ref|NP_578331.1| hypothetical protein PF0602 [P... 40 0.054 gi|14521445|ref|NP_126921.1| hypothetical protein [Pyrococc... 40 0.092 gi|34540191|ref|NP_904670.1| flavin reductase domain protei... 37 0.59 gi|23020721|ref|ZP_00060417.1| COG1853: Conserved protein/d... 37 0.59 gi|29346150|ref|NP_809653.1| flavoredoxin [Bacteroides thet... 36 1.3 gi|21961225|gb|AAH34528.1| SERPINB8 protein [Homo sapiens] 35 1.7 gi|23474184|ref|ZP_00129478.1| COG1853: Conserved protein/d... 35 2.3 gi|38504669|ref|NP_942130.1| serine (or cysteine) proteinas... 35 2.3 gi|33096781|emb|CAE11879.1| hypothetical protein [Homo sapi... 35 2.3 gi|1709895|sp|P50452|SPB8_HUMAN Cytoplasmic antiproteinase ... 35 2.3 gi|18542434|gb|AAL75581.1| cell division protein FtsZ [Myco... 35 2.9 gi|34498528|ref|NP_902743.1| conserved hypothetical protein... 35 2.9 gi|16263825|ref|NP_436617.1| putative sensor histidine kina... 34 3.8 Alignments
Related Structures Score E Sequences producing significant alignments: (bits) Value gi|21397795|ref|NP_653780.1| Flavin_Reduct, Flavin reductas... 147 4e-34 gi|30023353|ref|NP_834984.1| Nitrilotriacetate monooxygenas... 146 7e-34 gi|27468822|ref|NP_765459.1| conserved hypothetical protein... 140 4e-32 gi|15925649|ref|NP_373183.1| conserved hypothetical protein... 129 7e-29 gi|15614841|ref|NP_243144.1| BH2278~unknown conserved prote... 129 9e-29 gi|16080661|ref|NP_391489.1| ywrF [Bacillus subtilis] >gi|1... 128 1e-28 gi|21284308|ref|NP_647396.1| conserved hypothetical protein... 126 6e-28 gi|15606255|ref|NP_213633.1| putative protein [Aquifex aeol... 126 7e-28 gi|34496367|ref|NP_900582.1| conserved hypothetical protein... 121 2e-26 gi|23058082|ref|ZP_00083185.1| COG1853: Conserved protein/d... 117 3e-25 gi|27378442|ref|NP_769971.1| blr3331 [Bradyrhizobium japoni... 117 3e-25 gi|22992538|ref|ZP_00037177.1| COG1853: Conserved protein/d... 115 1e-24 gi|16263358|ref|NP_436151.1| conserved hypothetical protein... 112 1e-23 gi|33600096|ref|NP_887656.1| conserved hypothetical protein... 111 2e-23 gi|22986186|ref|ZP_00031288.1| COG1853: Conserved protein/d... 110 4e-23 gi|22961587|ref|ZP_00009193.1| COG1853: Conserved protein/d... 108 1e-22 gi|27376349|ref|NP_767878.1| blr1238 [Bradyrhizobium japoni... 108 2e-22 gi|11514649|pdb|1EJE|A Chain A, Crystal Structure Of An Fmn... 107 3e-22 gi|15678180|ref|NP_275295.1| conserved protein [Methanother... 107 3e-22 gi|15965181|ref|NP_385534.1| CONSERVED HYPOTHETICAL PROTEIN... 105 2e-21 gi|24372086|ref|NP_716128.1| hypothetical flavoprotein oxyg... 103 5e-21 gi|17546539|ref|NP_519941.1| CONSERVED HYPOTHETICAL PROTEIN... 102 2e-20 gi|15672060|ref|NP_266234.1| hypothetical protein [Lactococ... 101 2e-20 gi|38107230|gb|EAA53431.1| hypothetical protein MG07708.4 [... 101 3e-20 gi|16802803|ref|NP_464288.1| similar to unknown proteins [L... 100 4e-20 gi|40742224|gb|EAA61414.1| hypothetical protein AN7162.2 [A... 99 1e-19 gi|29374996|ref|NP_814149.1| conserved hypothetical protein... 99 1e-19 gi|16799829|ref|NP_470097.1| similar to unknown proteins [L... 98 2e-19 gi|15889046|ref|NP_354727.1| AGR_C_3198p [Agrobacterium tum... 97 4e-19 gi|17938392|ref|NP_535181.1| conserved hypothetical protein... 97 6e-19 gi|32041690|ref|ZP_00139273.1| COG1853: Conserved protein/d... 97 6e-19 gi|15890290|ref|NP_355962.1| AGR_L_355p [Agrobacterium tume... 97 6e-19 gi|16119642|ref|NP_396348.1| AGR_pAT_605p [Agrobacterium tu... 97 6e-19 gi|21284305|ref|NP_647393.1| conserved hypothetical protein... 96 1e-18 gi|15925645|ref|NP_373179.1| conserved hypothetical protein... 96 1e-18 gi|27378509|ref|NP_770038.1| blr3398 [Bradyrhizobium japoni... 96 1e-18 gi|15596841|ref|NP_250335.1| conserved hypothetical protein... 96 1e-18 gi|13471042|ref|NP_102611.1| unknown protein [Mesorhizobium... 95 2e-18 gi|28871435|ref|NP_794054.1| conserved hypothetical protein... 95 2e-18 gi|22985341|ref|ZP_00030462.1| COG1853: Conserved protein/d... 95 2e-18 gi|23059441|ref|ZP_00084409.1| COG1853: Conserved protein/d... 94 3e-18 gi|27377536|ref|NP_769065.1| blr2425 [Bradyrhizobium japoni... 93 9e-18 gi|32470907|ref|NP_863900.1| conserved hypothetical protein... 93 9e-18 gi|26988132|ref|NP_743557.1| conserved hypothetical protein... 92 2e-17 gi|17987202|ref|NP_539836.1| NITRILOTRIACETATE MONOOXYGENAS... 90 6e-17 gi|40746749|gb|EAA65905.1| hypothetical protein AN0876.2 [A... 89 1e-16 gi|39937225|ref|NP_949501.1| conserved hypothetical protein... 89 1e-16 gi|22961350|ref|ZP_00008956.1| COG1853: Conserved protein/d... 89 1e-16 gi|22983855|ref|ZP_00029022.1| COG1853: Conserved protein/d... 89 1e-16 gi|32403418|ref|XP_322322.1| hypothetical protein [Neurospo... 88 2e-16 gi|23501946|ref|NP_698073.1| conserved hypothetical protein... 87 5e-16 gi|22966071|ref|ZP_00013668.1| COG1853: Conserved protein/d... 87 5e-16 gi|15966354|ref|NP_386707.1| CONSERVED HYPOTHETICAL PROTEIN... 84 3e-15 gi|22957519|ref|ZP_00005218.1| COG1853: Conserved protein/d... 80 8e-14 gi|40740386|gb|EAA59576.1| hypothetical protein AN7922.2 [A... 79 1e-13 gi|21241252|ref|NP_640834.1| conserved hypothetical protein... 79 1e-13 gi|20090202|ref|NP_616277.1| Fmn-binding protein [Methanosa... 77 4e-13 gi|21229945|ref|NP_635862.1| conserved hypothetical protein... 76 1e-12 gi|15807567|ref|NP_296304.1| conserved hypothetical protein... 75 2e-12 gi|18203421|sp|Q9RRA9|YP85_DEIRA Hypothetical protein DR2585 75 2e-12 gi|22959663|ref|ZP_00007311.1| COG1853: Conserved protein/d... 75 3e-12 gi|23050581|ref|ZP_00077463.1| COG1853: Conserved protein/d... 74 6e-12 gi|23006840|ref|ZP_00048977.1| COG1853: Conserved protein/d... 73 7e-12 gi|27469154|ref|NP_765791.1| conserved hypothetical protein... 72 2e-11 gi|32267306|ref|NP_861338.1| conserved hypothetical protein... 72 2e-11 gi|15678602|ref|NP_275717.1| conserved protein [Methanother... 69 1e-10 gi|21229390|ref|NP_635312.1| conserved protein [Methanosarc... 68 2e-10 gi|20092136|ref|NP_618211.1| conserved hypothetical protein... 65 2e-09 gi|15616546|ref|NP_244852.1| BH3984~unknown conserved prote... 62 1e-08 gi|23135975|ref|ZP_00117706.1| COG1853: Conserved protein/d... 59 1e-07 gi|20091133|ref|NP_617208.1| flavoredoxin Flr [Methanosarci... 58 2e-07 gi|21229018|ref|NP_634940.1| flavoredoxin [Methanosarcina m... 57 7e-07 gi|16082413|ref|NP_394898.1| conserved hypothetical protein... 56 1e-06 gi|23048756|ref|ZP_00076178.1| COG1853: Conserved protein/d... 54 4e-06 gi|23021196|ref|ZP_00060880.1| COG1853: Conserved protein/d... 52 2e-05 gi|16077605|ref|NP_388419.1| ydfE [Bacillus subtilis] >gi|7... 49 2e-04 gi|40741327|gb|EAA60517.1| hypothetical protein AN4356.2 [A... 48 3e-04 gi|39995369|ref|NP_951320.1| flavoredoxin [Geobacter sulfur... 47 7e-04 gi|23053429|ref|ZP_00079638.1| COG1853: Conserved protein/d... 47 7e-04 gi|21227048|ref|NP_632970.1| putative NADPH-flavin oxidored... 46 0.001 gi|20092760|ref|NP_618835.1| flavoredoxin [Methanosarcina a... 45 0.002 gi|23054870|ref|ZP_00081007.1| COG1853: Conserved protein/d... 44 0.004 gi|15612955|ref|NP_241258.1| BH0392~unknown conserved prote... 44 0.006 gi|18203185|sp|Q9KIT1|FLR_DESGI Flavoredoxin >gi|11356328|p... 43 0.011 gi|14590716|ref|NP_142786.1| hypothetical protein PH0856 [P... 42 0.024 gi|23056696|ref|ZP_00082581.1| COG1853: Conserved protein/d... 41 0.031 gi|21232632|ref|NP_638549.1| conserved hypothetical protein... 41 0.031 gi|18976974|ref|NP_578331.1| hypothetical protein PF0602 [P... 40 0.054 gi|14521445|ref|NP_126921.1| hypothetical protein [Pyrococc... 40 0.092 gi|34540191|ref|NP_904670.1| flavin reductase domain protei... 37 0.59 gi|23020721|ref|ZP_00060417.1| COG1853: Conserved protein/d... 37 0.59 gi|29346150|ref|NP_809653.1| flavoredoxin [Bacteroides thet... 36 1.3 gi|21961225|gb|AAH34528.1| SERPINB8 protein [Homo sapiens] 35 1.7 gi|23474184|ref|ZP_00129478.1| COG1853: Conserved protein/d... 35 2.3 gi|38504669|ref|NP_942130.1| serine (or cysteine) proteinas... 35 2.3 gi|33096781|emb|CAE11879.1| hypothetical protein [Homo sapi... 35 2.3 gi|1709895|sp|P50452|SPB8_HUMAN Cytoplasmic antiproteinase ... 35 2.3 gi|18542434|gb|AAL75581.1| cell division protein FtsZ [Myco... 35 2.9 gi|34498528|ref|NP_902743.1| conserved hypothetical protein... 35 2.9 gi|16263825|ref|NP_436617.1| putative sensor histidine kina... 34 3.8
>gi|21397795|ref|NP_653780.1| Flavin_Reduct, Flavin reductase like domain [Bacillus anthracis A2012] gi|30265345|ref|NP_847722.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gi|30260023|gb|AAP29208.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 203 Score = 147 bits (370), Expect = 4e-34 Identities = 77/182 (42%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 K+NYK L GSI+PRP+A V+++ ++G N AP+S+F V+A P +I+ S ++ GE K Sbjct: 12 KENYKLLTGSIIPRPVAFVTSVTKDGVLNGAPYSYFNIVAANPPLISVS--VQRKAGERK 69 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 DT RN + EFVV+ E + IN T+ LP E E +LA LTPI+SD++ + E+ Sbjct: 70 DTSRNAIEKGEFVVHISDESYVAAINETAANLPSNESEIELAKLTPIESDVISVPGVKEA 129 Query: 5578 KIHFECIYRDHLSYG---DQPGCGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGN 5408 I EC+ + G D P C ++ G VV+ HV E L E GRI E KPV R AG+ Sbjct: 130 NIRMECVLERAIPLGGTEDSPAC-DLLIGRVVRFHVAEHLYENGRIHAEGLKPVSRLAGH 188 Query: 5407 DW 5402 ++ Sbjct: 189 NY 190
>gi|30023353|ref|NP_834984.1| Nitrilotriacetate monooxygenase component B [Bacillus cereus ATCC 14579] gi|29898914|gb|AAP12185.1| Nitrilotriacetate monooxygenase component B [Bacillus cereus ATCC 14579] Length = 203 Score = 146 bits (368), Expect = 7e-34 Identities = 76/182 (41%), Positives = 110/182 (60%), Gaps = 3/182 (1%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 KDNYK L GSI+PRP+A V+++ + G N AP+S+F V+A P +I+ S ++ GE K Sbjct: 12 KDNYKLLTGSIIPRPVAFVTSVTKEGVLNGAPYSYFNIVAANPPLISVS--VQRKAGERK 69 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 DT RN + EFVV+ E + IN T+ LP E E +LA LTPI+S+++ + E+ Sbjct: 70 DTSRNAIEKGEFVVHISDESYVAAINETAANLPPNESEIELAKLTPIESEVISVPGVKEA 129 Query: 5578 KIHFECIYRDHLSYG---DQPGCGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGN 5408 I EC+ + G D P C ++ G VV+ HV E L E+GRI E KP+ R AG+ Sbjct: 130 NIRMECVLERAIPLGGTEDSPAC-DLLIGRVVRFHVAEHLYEKGRIHAEGLKPISRLAGH 188 Query: 5407 DW 5402 ++ Sbjct: 189 NY 190
>gi|27468822|ref|NP_765459.1| conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|27316370|gb|AAO05545.1| conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] Length = 203 Score = 140 bits (353), Expect = 4e-32 Identities = 76/180 (42%), Positives = 107/180 (59%), Gaps = 1/180 (0%) Frame = -1 Query: 5932 NYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDT 5753 NYK L GSI+PRPIA V+T N G N APFSFF V+ P +IA + ++ + G KDT Sbjct: 14 NYKLLSGSIIPRPIAFVTTQNLKGDINAAPFSFFNVVNHTPPMIAIA--VQRTKGNRKDT 71 Query: 5752 PRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKI 5573 NI + EFVV+ E I++ +N T+ L YG +E K L+ IDSD++K I E+K+ Sbjct: 72 SINIEQSGEFVVHITDEAIVNDVNETAAPLEYGVNELKRTSLSMIDSDLIKVPAIKEAKV 131 Query: 5572 HFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEEL-LEEGRIITENFKPVGRGAGNDWIL 5396 FEC + G++ +I GE+V H++EE+ E+ +I PV R AGND+ L Sbjct: 132 RFECKLHQIVQLGNKDNGSDLIIGEIVVYHIDEEVYFEDSKIDANQLNPVARLAGNDYSL 191
>gi|15925649|ref|NP_373183.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|15928245|ref|NP_375778.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|25307453|pir||C90074 conserved hypothetical protein SA2452 [imported] - Staphylococcus aureus (strain N315) gi|13702617|dbj|BAB43757.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14248434|dbj|BAB58821.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] Length = 203 Score = 129 bits (325), Expect = 7e-29 Identities = 72/191 (37%), Positives = 111/191 (58%), Gaps = 2/191 (1%) Frame = -1 Query: 5968 MKTFETNG-EFKDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFS 5792 M TF+ ++NYK LIGSI+PRPIA V+T+N++ + N APFSFF V+ P ++A + Sbjct: 1 MYTFDAQSLTARENYKLLIGSIIPRPIAFVTTLNQDASVNAAPFSFFNIVNNHPPMVAIA 60 Query: 5791 PMIKSSTGEMKDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDS 5612 ++ + G+ KDT NI R +FVV+ ED + IN T+ L YG+ E GL+ + S Sbjct: 61 --VQRAGGKRKDTALNIERTGDFVVHITDEDNVQDINETAAPLAYGDSELSRTGLSLLTS 118 Query: 5611 DMVKAKRILESKIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLE-EGRIITENF 5435 +K I ++K+ FEC + GD +I GE+V H+++ + E + +I Sbjct: 119 TTIKTPGIKDAKMRFECKLSQMILLGDVLDGADLIIGEIVTYHIDDSIYEGDFKINPHAL 178 Query: 5434 KPVGRGAGNDW 5402 + V R AGND+ Sbjct: 179 QAVSRLAGNDY 189
>gi|15614841|ref|NP_243144.1| BH2278~unknown conserved protein [Bacillus halodurans] gi|18203173|sp|Q9KAK9|YM78_BACHD Hypothetical protein BH2278 gi|25307454|pir||F83934 hypothetical protein BH2278 [imported] - Bacillus halodurans (strain C-125) gi|10174898|dbj|BAB05997.1| BH2278~unknown conserved protein [Bacillus halodurans] Length = 209 Score = 129 bits (324), Expect = 9e-29 Identities = 71/181 (39%), Positives = 108/181 (59%), Gaps = 2/181 (1%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 K+NY+ LIG++LPRPIA V+T ++ G N APFSF+ ++A+P +I S + + G K Sbjct: 11 KENYRLLIGAVLPRPIAFVTTKSKAGVVNAAPFSFYNVLTAEPPLIGIS-VGRKPDGTPK 69 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 DT RN EFVV+ V E ++ +N +S+ LP E E + AGLT + S++V + ES Sbjct: 70 DTARNGQEIGEFVVHVVDEQNVEAVNVSSIPLPPEESEVEYAGLTEVPSEVVSVPSLAES 129 Query: 5578 KIHFECIYRDHLSYGDQPG--CGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGND 5405 +I EC + + G + G + G VV V ++L ++G I TE +PV R AGN+ Sbjct: 130 RIRLECKVENVIPIGGKGGEPAADFLIGRVVHYEVADDLFQDGGIDTEALRPVSRLAGNE 189 Query: 5404 W 5402 + Sbjct: 190 Y 190
>gi|16080661|ref|NP_391489.1| ywrF [Bacillus subtilis] gi|18201942|sp|O05220|YWRF_BACSU Hypothetical protein ywrF gi|7430348|pir||H70068 hypothetical protein ywrF - Bacillus subtilis gi|1929333|emb|CAB07792.1| ywrF [Bacillus subtilis] gi|2636133|emb|CAB15625.1| ywrF [Bacillus subtilis subsp. subtilis str. 168] Length = 205 Score = 128 bits (322), Expect = 1e-28 Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 4/183 (2%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 KD YK L G+++PRPIA V+T++ G N APFSF+ VS+ P +++ S + + G K Sbjct: 12 KDTYKLLSGTVIPRPIAFVTTLSSGGAVNAAPFSFYNVVSSDPPLLSIS--VNRTEGRQK 69 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 DT RN EFVV+ E II+ IN T+ L E E L P++S V I E+ Sbjct: 70 DTARNAVENGEFVVHVSDEAIIEDINETAASLRPDESELTRTSLHPVESKAVSVPGIKEA 129 Query: 5578 KIHFECIYRDHLSYGDQPG--CGQIITGEVVKVHVNEEL--LEEGRIITENFKPVGRGAG 5411 ++ FEC H+++ + G ++ G VV H++E++ E+G I+T+ KP R AG Sbjct: 130 RVRFECKLERHITFDNDQGITTADLLIGRVVCFHLDEKVYDAEKGYILTDELKPASRLAG 189 Query: 5410 NDW 5402 N + Sbjct: 190 NHY 192
>gi|21284308|ref|NP_647396.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|21205752|dbj|BAB96444.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 203 Score = 126 bits (317), Expect = 6e-28 Identities = 72/191 (37%), Positives = 109/191 (57%), Gaps = 2/191 (1%) Frame = -1 Query: 5968 MKTFETNG-EFKDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFS 5792 M TF+ ++NYK LIGSI+PRPIA V+T+N++ + N APFSFF V+ P +IA + Sbjct: 1 MYTFDAQSLTARENYKLLIGSIIPRPIAFVTTLNQDASVNAAPFSFFNIVNNHPPMIAIA 60 Query: 5791 PMIKSSTGEMKDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDS 5612 ++ + G+ KDT NI R +FVV+ ED + IN T+ L YG+ E L+ + S Sbjct: 61 --VQRAGGKRKDTALNIERTGDFVVHITDEDNVQDINETAAPLAYGDSELSRTELSLLTS 118 Query: 5611 DMVKAKRILESKIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLE-EGRIITENF 5435 +K I ++K+ FEC + GD +I GE+V H+ + + E + +I Sbjct: 119 TTIKTPGIKDAKMRFECKLSQMILLGDVLDGADLIIGEIVTYHIEDSIYEGDFKINPHAL 178 Query: 5434 KPVGRGAGNDW 5402 + V R AGND+ Sbjct: 179 QAVSRLAGNDY 189
>gi|15606255|ref|NP_213633.1| putative protein [Aquifex aeolicus] gi|18202106|sp|O67071|Y928_AQUAE Hypothetical protein AQ_928 gi|7430350|pir||D70380 hypothetical protein aq_928 - Aquifex aeolicus gi|2983456|gb|AAC07037.1| putative protein [Aquifex aeolicus VF5] Length = 196 Score = 126 bits (316), Expect = 7e-28 Identities = 71/187 (37%), Positives = 112/187 (59%), Gaps = 1/187 (0%) Frame = -1 Query: 5956 ETNGEFKDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKS 5777 ET+G+ YK ++G ++PRPI VSTI+++G N+APFSFF V+ +P ++ S + Sbjct: 7 ETDGDTL--YKLVLGLVVPRPIGWVSTISKDGILNIAPFSFFNVVNDEPPVLMIS-VSNR 63 Query: 5776 STGEMKDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKA 5597 +KDT +N+ KEFVVN VSE++ +++ T E P +EF+ AGLTP S VKA Sbjct: 64 DDNTLKDTVKNVLDTKEFVVNMVSEEVFEKMLITGEEFPPEVNEFEKAGLTPETSKFVKA 123 Query: 5596 KRILESKIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEEG-RIITENFKPVGR 5420 RI E+K+ FEC ++ D +I GE + + V + +L+E + E ++P+GR Sbjct: 124 PRIKEAKVSFECKLYKYVPVYDM----HVIFGEALLIKVEDTILDENLNVNYEKYRPIGR 179 Query: 5419 GAGNDWI 5399 G ++ Sbjct: 180 LGGKYYV 186
>gi|34496367|ref|NP_900582.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] gi|34102220|gb|AAQ58586.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 201 Score = 121 bits (304), Expect = 2e-26 Identities = 69/187 (36%), Positives = 100/187 (53%) Frame = -1 Query: 5929 YKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTP 5750 Y+ L+G +LPRPIA VST + G N+APFSFF +S P ++ S ++K + KDT Sbjct: 14 YQLLVGCVLPRPIAWVSTQDLKGVCNLAPFSFFNVMSVNPPLLGIS-ILKQAPERDKDTL 72 Query: 5749 RNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIH 5570 NI E VVN VS+ + +N + P DEF+LAG+ DS VK + E+ + Sbjct: 73 ANIRLTGELVVNIVSQPLAAAMNASCGAYPADVDEFELAGVAKTDSSTVKPPGVAEAPVR 132 Query: 5569 FECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGNDWILCD 5390 EC L++G G G ++ EV +HV E L +G I + + VG+ GN + L + Sbjct: 133 LECTLHQCLTFGHGSGAGNLVLAEVKCIHVAEGLWRDGAIDEQALQAVGKLGGNRYSLAE 192 Query: 5389 HLIQRER 5369 ER Sbjct: 193 EAFTLER 199
>gi|23058082|ref|ZP_00083185.1| COG1853: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [Pseudomonas fluorescens PfO-1] Length = 232 Score = 117 bits (294), Expect = 3e-25 Identities = 71/181 (39%), Positives = 101/181 (55%), Gaps = 2/181 (1%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 ++ YK LIGS++PRPIA+V+TI+ G N APFSFF A+SA P I+A + K Sbjct: 12 REKYKILIGSVVPRPIALVTTIDAEGRVNAAPFSFFNALSADPPILALG-VENYGDQSPK 70 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 DT RNI +EF VN VS+ +++ +N +V G DE AGLT I VK RI E+ Sbjct: 71 DTTRNIQMNQEFTVNIVSDALVEAMNVCAVPFAPGFDELTAAGLTAIPGTSVKCPRIGEA 130 Query: 5578 KIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEEGRIITE--NFKPVGRGAGND 5405 + EC L+ G +II GEV+ HV +EL++ + + +GR G+ Sbjct: 131 PVALECRRMMALNIGQS---REIIFGEVLMAHVRDELIDPKTLYIDQLGLDAIGRMGGHG 187 Query: 5404 W 5402 + Sbjct: 188 Y 188
>gi|27378442|ref|NP_769971.1| blr3331 [Bradyrhizobium japonicum] gi|27351590|dbj|BAC48596.1| blr3331 [Bradyrhizobium japonicum USDA 110] Length = 225 Score = 117 bits (293), Expect = 3e-25 Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 2/179 (1%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 +D YK L G ++PRPIA+V+T++ENG N APFSFF S P +I K K Sbjct: 20 RDRYKLLCGVVVPRPIALVTTLDENGAVNAAPFSFFNVFSESPALIVLGLQHKPDHSP-K 78 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 DT RNI R+ EFVV+ V E + +N +V+ P G+ E GL + S VK R+ + Sbjct: 79 DTTRNIHRDGEFVVHMVDEALSVAMNDCAVDFPSGDSEVAATGLATLPSVDVKVPRLAAA 138 Query: 5578 KIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEEGRIIT--ENFKPVGRGAGN 5408 EC R H+ P +++ GEV++VH E L++E + + ++P+GR GN Sbjct: 139 PFALEC--RRHVVMTFSPD-RELLVGEVLRVHAREGLVDEANMYVDLDAYRPIGRMFGN 194
>gi|22992538|ref|ZP_00037177.1| COG1853: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [Enterococcus faecium] Length = 204 Score = 115 bits (288), Expect = 1e-24 Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 3/182 (1%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 ++NYK LIGS++PRP+AVV+T + N+APFS+F VS+ I++ + I+ +K Sbjct: 12 RENYKLLIGSVIPRPVAVVTTKSAKDIVNIAPFSYFNIVSSNRPILSLA--IQRKQDAVK 69 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 DT +NI +E V++ + ED ++++N T+ LP E E L LT DS ++ + E+ Sbjct: 70 DTAKNILETREAVIHILDEDNVEEVNKTAANLPNEESELYLTDLTLTDSVIISVPALTEA 129 Query: 5578 KIHFECIYRDHLSYGDQ-PGCGQIITGEVVKVHVNEELLEE--GRIITENFKPVGRGAGN 5408 K+ FE +H+ ++ + EV K H+NE + ++ GRI V R AGN Sbjct: 130 KVRFETSLYEHVEIRNKNKVTADLFLLEVQKYHLNETVYDDKTGRIDPRKLNAVSRLAGN 189 Query: 5407 DW 5402 D+ Sbjct: 190 DY 191
>gi|16263358|ref|NP_436151.1| conserved hypothetical protein [Sinorhizobium meliloti] gi|25504559|pir||A95375 conserved hypothetical protein SMa1653 [imported] - Sinorhizobium meliloti (strain 1021) magaplasmid pSymA gi|14524041|gb|AAK65563.1| conserved hypothetical protein [Sinorhizobium meliloti] Length = 241 Score = 112 bits (280), Expect = 1e-23 Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 2/186 (1%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 KD Y+ L + PRPIA+V+TI+E G N AP SFF S P ++ + G K Sbjct: 11 KDRYRLLCAFVGPRPIALVTTIDEQGCKNAAPMSFFNVFSHDPPLLILGMQTRPD-GNSK 69 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 DT NI R EFVV+ V I ++ T + P DE +++GLT + S V RI ES Sbjct: 70 DTVANIRRSGEFVVHMVDMAIAKEMIITGINFPSDVDEIQVSGLTSVSSVKVAPPRIQES 129 Query: 5578 KIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLE-EGR-IITENFKPVGRGAGND 5405 EC L+YG + I+ GEV++++V +E L+ GR ++ E ++P+ R N+ Sbjct: 130 PCAMECRVSQILNYGRR----SIVIGEVLQMYVRDECLDASGRYVLPEVYQPIARLHANN 185 Query: 5404 WILCDH 5387 +I+ D+ Sbjct: 186 YIVADN 191
>gi|33600096|ref|NP_887656.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] gi|33567694|emb|CAE31608.1| conserved hypothetical protein [Bordetella bronchiseptica] Length = 200 Score = 111 bits (278), Expect = 2e-23 Identities = 64/176 (36%), Positives = 94/176 (53%) Frame = -1 Query: 5929 YKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTP 5750 YKFL+ S++PRPIA+V+++ E+G N APFS + +S P ++ S + G KDT Sbjct: 19 YKFLMASVVPRPIALVTSLGEDGVLNAAPFSSYVVLSIDPPMLGISVAFRDD-GACKDTR 77 Query: 5749 RNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIH 5570 RNI R EFV+N V+ D++ Q+ P E + AGLT I S +V RI +S + Sbjct: 78 RNIERSGEFVINSVTADMVAQVQQCGQAYPSDVSEAQAAGLTAIASQVVSVPRIAQSPLQ 137 Query: 5569 FECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGNDW 5402 FEC R + +G + ++ GEVV H L + R+ GR AG + Sbjct: 138 FECRLRHCVEFGQRRSA--LLVGEVVLAHAAVGLAQAHRVDPAVLNAAGRLAGTTY 191
>gi|22986186|ref|ZP_00031288.1| COG1853: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [Burkholderia fungorum] Length = 196 Score = 110 bits (275), Expect = 4e-23 Identities = 66/179 (36%), Positives = 98/179 (54%), Gaps = 2/179 (1%) Frame = -1 Query: 5929 YKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTP 5750 YK + I+PRPIA+V+T+ +GT N APFS F + +P I+ S + + + G +KDT Sbjct: 14 YKLMASLIVPRPIALVTTLGADGTINAAPFSMFNMLGEEPPIVMIS-VNRVADGTLKDTA 72 Query: 5749 RNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIH 5570 NI R EFVV+ E I D+++ LP E GLTP+ S V RI E+ + Sbjct: 73 VNIMRTGEFVVHLADEAIADKMHRCGERLPPNVSELAEVGLTPVPSSHVAPPRIAEAPVA 132 Query: 5569 FECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELL--EEGRIITENFKPVGRGAGNDWI 5399 FEC + L + QI G V ++H +EL+ E R+ +++ PVGR +D+I Sbjct: 133 FECTTWETLETTSR----QIFIGRVHRLHARDELIDTETWRVRLQHYFPVGRFGASDYI 187
>gi|22961587|ref|ZP_00009193.1| COG1853: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [Rhodopseudomonas palustris] gi|39937472|ref|NP_949748.1| conserved unknown protein [Rhodopseudomonas palustris] gi|39651331|emb|CAE29853.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] Length = 205 Score = 108 bits (271), Expect = 1e-22 Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 3/166 (1%) Frame = -1 Query: 5908 ILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREK 5729 I PRPI +S+ + G N+AP+SFF A + P +I FS S+T KDT NI R Sbjct: 24 IAPRPIGWISSCDAEGRVNLAPYSFFNAFNYHPPLIGFS----STT--WKDTVANIQRTG 77 Query: 5728 EFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECIYRD 5549 EFV N V+ D+ +N TS +P+ DEF L LT +DS++VK R+ ES + FEC + Sbjct: 78 EFVWNLVTMDLAQAMNATSASVPHEVDEFSLGNLTKLDSELVKPPRVAESPVSFECKLSE 137 Query: 5548 HLSYGDQPGC---GQIITGEVVKVHVNEELLEEGRIITENFKPVGR 5420 + G + GEVV VH+++ L+E+G T +P+ R Sbjct: 138 IIRLKGADGVEVDAWLTIGEVVMVHIDKRLIEDGVYQTAAARPIVR 183
>gi|27376349|ref|NP_767878.1| blr1238 [Bradyrhizobium japonicum] gi|27349489|dbj|BAC46503.1| blr1238 [Bradyrhizobium japonicum USDA 110] Length = 206 Score = 108 bits (269), Expect = 2e-22 Identities = 56/173 (32%), Positives = 96/173 (55%) Frame = -1 Query: 5929 YKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTP 5750 Y+ + G ++PRPIA V++++ +G N+APFS FT VS KP ++A S + + KDT Sbjct: 15 YRLMTGIVVPRPIAWVTSLSRSGVLNLAPFSAFTFVSQKPPMLAIS--VGRKGADYKDTA 72 Query: 5749 RNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIH 5570 NI +E+V++ ++ ++ +S+E P E GL + + +K R+ + + Sbjct: 73 HNILDTEEYVIHIADTPLMSAVHDSSIEHPPEVSEVAELGLETLSCERIKVPRLAAAPVA 132 Query: 5569 FECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAG 5411 EC +R L +GD ++I GEVV H+ + L+E G++ T P+ R G Sbjct: 133 MECRFRQCLEFGD--ARSRLIVGEVVMFHIRDGLVENGKVETRALDPIARIGG 183
>gi|11514649|pdb|1EJE|A Chain A, Crystal Structure Of An Fmn-Binding Protein Length = 192 Score = 107 bits (268), Expect = 3e-22 Identities = 64/175 (36%), Positives = 93/175 (53%) Frame = -1 Query: 5908 ILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREK 5729 + PRP +V+T++E G N APFSF VS P ++AF+ + T RNI Sbjct: 24 LTPRPTVMVTTVDEEGNINAAPFSFTMPVSIDPPVVAFA------SAPDHHTARNIESTH 77 Query: 5728 EFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECIYRD 5549 EFV+N DII+++ T+ ++P GE+E + AGL S VK RI+E+ H EC Sbjct: 78 EFVINITPADIIERMWVTARDIPAGENELEAAGLAWTSSRRVKPPRIVEAPGHLECELLR 137 Query: 5548 HLSYGDQPGCGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGNDWILCDHL 5384 GD +ITG VV V ++EG + E+ KPV GN +++ DH+ Sbjct: 138 MFEVGDH----NLITGSVVSASVRSGAVKEGLLDVESVKPVLHVGGNKFVVGDHV 188
>gi|15678180|ref|NP_275295.1| conserved protein [Methanothermobacter thermautotrophicus] gi|13124376|sp|O26255|P152_METTH Protein MTH152 gi|7430349|pir||G69069 hypothetical protein MTH152 - Methanobacterium thermoautotrophicum (strain Delta H) gi|2621193|gb|AAB84658.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 186 Score = 107 bits (268), Expect = 3e-22 Identities = 64/175 (36%), Positives = 93/175 (53%) Frame = -1 Query: 5908 ILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREK 5729 + PRP +V+T++E G N APFSF VS P ++AF+ + T RNI Sbjct: 18 LTPRPTVMVTTVDEEGNINAAPFSFTMPVSIDPPVVAFA------SAPDHHTARNIESTH 71 Query: 5728 EFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECIYRD 5549 EFV+N DII+++ T+ ++P GE+E + AGL S VK RI+E+ H EC Sbjct: 72 EFVINITPADIIERMWVTARDIPAGENELEAAGLAWTSSRRVKPPRIVEAPGHLECELLR 131 Query: 5548 HLSYGDQPGCGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGNDWILCDHL 5384 GD +ITG VV V ++EG + E+ KPV GN +++ DH+ Sbjct: 132 MFEVGDH----NLITGSVVSASVRSGAVKEGLLDVESVKPVLHVGGNKFVVGDHV 182
>gi|15965181|ref|NP_385534.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] gi|15074361|emb|CAC46007.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti] Length = 200 Score = 105 bits (261), Expect = 2e-21 Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 3/176 (1%) Frame = -1 Query: 5908 ILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREK 5729 + PRPI + T +G N+ P+SFF A+S +P ++ F+ S+G KD+ RNI Sbjct: 21 VSPRPIGWIGTRGADGALNLGPYSFFNAISDRPKLVMFA-----SSG-YKDSVRNIEATG 74 Query: 5728 EFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECIYRD 5549 EF +F S ++ + +N TSV P+GE EF++AGLTP++ +VKA + E+ EC + Sbjct: 75 EFTASFASRNLSEAVNLTSVAAPHGESEFEIAGLTPVEGTLVKAPFVGEAFAALECRMTE 134 Query: 5548 HLSYGDQPGC---GQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGNDWILCD 5390 G ++ G VV +H+ EE + +GR KP+ R D+ CD Sbjct: 135 IFRPKGIDGVVSDSYVVIGAVVGIHIREEAIRDGRFDMATVKPLARLGYMDY--CD 188
>gi|24372086|ref|NP_716128.1| hypothetical flavoprotein oxygenases [Shewanella oneidensis MR-1] gi|24345970|gb|AAN53573.1| conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 209 Score = 103 bits (257), Expect = 5e-21 Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 5/171 (2%) Frame = -1 Query: 5908 ILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREK 5729 + PRPI +S+ N G N+AP+SFF + KP II F+ STG KD+ NI Sbjct: 26 VAPRPIGWISSRNAQGQRNLAPYSFFNCFNYKPPIIGFA-----STG-WKDSVANIVDTG 79 Query: 5728 EFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECIYRD 5549 EFV N + + +++N TS LP GE+EF AGLTP +VKA+ + ES ++FEC Sbjct: 80 EFVWNLTTRSLAEKMNQTSAMLPRGENEFAFAGLTPKSGTIVKAELVAESPVNFECKLSQ 139 Query: 5548 HL----SYGDQPGCGQIITGEVVKVHVNEELLE-EGRIITENFKPVGRGAG 5411 + + GD+ ++ GEVV VH+ + LL+ +G T +PV R G Sbjct: 140 CIQLTAANGDKIDT-WLVLGEVVAVHIAKHLLDSDGVYQTALAEPVLRAGG 189
>gi|17546539|ref|NP_519941.1| CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] gi|17428837|emb|CAD15522.1| CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] Length = 207 Score = 102 bits (253), Expect = 2e-20 Identities = 62/167 (37%), Positives = 87/167 (52%), Gaps = 3/167 (1%) Frame = -1 Query: 5902 PRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREKEF 5723 PRPI +ST + G N+AP+SFF + KP ++AFS + K KD+ RN EF Sbjct: 28 PRPIGWISTRDAEGRLNLAPYSFFNIFNYKPPLVAFSSVGK------KDSVRNAEATGEF 81 Query: 5722 VVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECIYRDHL 5543 V N + + +Q+N TS++ P G DEF LAGLTP V A R+ +S + EC Sbjct: 82 VYNLATRPLAEQVNQTSIDAPPGIDEFALAGLTPARCIEVAAPRVAQSPVSLECKVTQVQ 141 Query: 5542 SYGDQPGCG---QIITGEVVKVHVNEELLEEGRIITENFKPVGRGAG 5411 G ++ GEVV VH++ LL +G T +P+ R G Sbjct: 142 QLAGIDGVALNTWMVFGEVVAVHIDRALLRDGIYDTAAAQPILRAGG 188
>gi|15672060|ref|NP_266234.1| hypothetical protein [Lactococcus lactis subsp. lactis] gi|25307461|pir||F86634 hypothetical protein yaiB [imported] - Lactococcus lactis subsp. lactis (strain IL1403) gi|12722921|gb|AAK04176.1| HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis] Length = 196 Score = 101 bits (252), Expect = 2e-20 Identities = 70/192 (36%), Positives = 100/192 (52%), Gaps = 3/192 (1%) Frame = -1 Query: 5968 MKTFETNG-EFKDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFS 5792 MK+++ N + K YK L GSI+PRPIA V++ N G NVAPFSFF S+ P Sbjct: 1 MKSYQANELDEKTVYKLLSGSIVPRPIAWVTSQNLEGLVNVAPFSFFNVASSNP------ 54 Query: 5791 PMIKSSTGEMKDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDS 5612 P++ S KD+ N+ KE VV+ V+ED ++ +N T+ L E + L + S Sbjct: 55 PLLSISFTGNKDSLNNLLTTKEAVVHLVNEDNVELMNQTAAPLAEHISEAEEFSLELVPS 114 Query: 5611 DMVKAKRILESKIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEEG--RIITEN 5438 V+ + ES + E HL G+ G ++ EVV EELL+E + Sbjct: 115 QKVQVPSLKESNVRLETKLYHHLPLGES---GHLVLLEVVNFSFAEELLDEENFHVNLNK 171 Query: 5437 FKPVGRGAGNDW 5402 KPVGR AG+D+ Sbjct: 172 LKPVGRLAGDDY 183
>gi|38107230|gb|EAA53431.1| hypothetical protein MG07708.4 [Magnaporthe grisea 70-15] Length = 297 Score = 101 bits (251), Expect = 3e-20 Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%) Frame = -1 Query: 5977 NMTMKTFETNGEFKDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIA 5798 ++T+ + + + NYK LIG+++PRPIA VST+ +G++N+APFS+F ++ P + Sbjct: 65 HITIDPYAPDRPARLNYKLLIGAVVPRPIAFVSTVGADGSHNLAPFSYFNMINHDPPLFV 124 Query: 5797 FSPMIKSSTGEMKDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPI 5618 +S KDT R++ E V+N +SE ++ N TSV P+G E+ ++GLTP+ Sbjct: 125 IGFASAASGETAKDTVRHLSETGECVINIISESFVEAANATSVNAPHGVSEWDISGLTPV 184 Query: 5617 -DSDMVKAKRI------LESKIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEE 5459 D + VK R+ +E K+ ++ + G G +I G V + E Sbjct: 185 RDCETVKPPRVGEAIFSVEGKVESLREFQSKSTPGKTSGTMAVIEGTRFWVREDAINAER 244 Query: 5458 GRIITENFKPVGRGAG 5411 I + +P+ R G Sbjct: 245 DLIDPKVLRPISRLGG 260
>gi|16802803|ref|NP_464288.1| similar to unknown proteins [Listeria monocytogenes EGD-e] gi|25307460|pir||AI1169 hypothetical protein lmo0761 [imported] - Listeria monocytogenes (strain EGD-e) gi|16410150|emb|CAC98839.1| lmo0761 [Listeria monocytogenes] Length = 206 Score = 100 bits (249), Expect = 4e-20 Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 5/195 (2%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENG-TNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEM 5762 K+NYKFL GSI+PRPIA V+T+ E+G T N APFSFF VS+ P I++ + ++ + GE Sbjct: 12 KENYKFLTGSIIPRPIAFVTTLAEDGVTVNAAPFSFFNVVSSDPAIVSIA--VQRADGEQ 69 Query: 5761 KDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILE 5582 KDT RN KE ++ VSE ++++N T+ L E + L +K +I E Sbjct: 70 KDTARNAAFTKELNIHIVSESFVEEMNKTAARLAPDVSEIEKTSLHLEQVPGMKTPKISE 129 Query: 5581 SKIHFECIYRDHLSYGDQPG--CGQIITGEVVKVHVNEELL--EEGRIITENFKPVGRGA 5414 + I + + G +I ++ +E+ E I+ E PV R A Sbjct: 130 ANIVLTSKLEQIIPIKNDAGEVVSDLILARILTYDFADEVFDSEHHYILPEKLAPVARLA 189 Query: 5413 GNDWILCDHLIQRER 5369 GND+ + + ER Sbjct: 190 GNDYTKLGDIFRIER 204
>gi|40742224|gb|EAA61414.1| hypothetical protein AN7162.2 [Aspergillus nidulans FGSC A4] Length = 241 Score = 99.4 bits (246), Expect = 1e-19 Identities = 57/168 (33%), Positives = 94/168 (55%), Gaps = 5/168 (2%) Frame = -1 Query: 5908 ILPRPIAVVST--INENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFR 5735 ++PRPI +ST +GT N+AP+S F ++ P + FS ++ + E KDT RN+ Sbjct: 21 VIPRPIGWISTKSAGPSGTANLAPYSQFNNLTFDPPYVMFSSN-QTPSNERKDTVRNVES 79 Query: 5734 EKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECIY 5555 +FV N + + + +N T+ ++PYG DEF+ AGL+ D+++V + ES + FEC+Y Sbjct: 80 TGQFVWNLATYPLREAVNITAEQVPYGIDEFERAGLSKEDANLVDVPMVKESPVKFECVY 139 Query: 5554 RDHLSYGDQPGCG--QIITGEVVKVHVNEELL-EEGRIITENFKPVGR 5420 + P G II G VV VH+ + ++ E G + +P+ R Sbjct: 140 HSTIRLPGNPPMGTVDIIIGRVVGVHIADGVINERGLLDVSRTQPIAR 187
>gi|29374996|ref|NP_814149.1| conserved hypothetical protein [Enterococcus faecalis V583] gi|29342455|gb|AAO80220.1| conserved hypothetical protein [Enterococcus faecalis V583] Length = 206 Score = 99.0 bits (245), Expect = 1e-19 Identities = 69/186 (37%), Positives = 95/186 (51%), Gaps = 7/186 (3%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINE-NGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEM 5762 K YKFL GSI+PRPIA V+T + G N APFSFF A +A+ + S I E Sbjct: 12 KTAYKFLSGSIIPRPIAWVTTQDTATGVVNAAPFSFFNAAAAEIPLATLS--ILRPDEEP 69 Query: 5761 KDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILE 5582 KDT RNI KE V++FV+ED++ Q+N TS L E G+ I S V I Sbjct: 70 KDTARNILATKELVIHFVNEDVLTQMNQTSASLAAEISEIDTFGIETIASQTVAVPAIKA 129 Query: 5581 SKIHFECIYRDHLSYGDQPGCGQIITG----EVVKVHVNEELLEEGR--IITENFKPVGR 5420 + I E ++ + GQIIT E+ + + + +E I+ E +P+ R Sbjct: 130 APIRMEARLHQYVPIANHE--GQIITDLFIVEITDFYFDSAVFDEEHQYILPEKLQPIAR 187 Query: 5419 GAGNDW 5402 AGND+ Sbjct: 188 LAGNDY 193
>gi|16799829|ref|NP_470097.1| similar to unknown proteins [Listeria innocua] gi|25307457|pir||AC1527 hypothetical protein homolog lin0755 [imported] - Listeria innocua (strain Clip11262) gi|16413206|emb|CAC95987.1| lin0755 [Listeria innocua] Length = 206 Score = 98.2 bits (243), Expect = 2e-19 Identities = 64/195 (32%), Positives = 100/195 (51%), Gaps = 5/195 (2%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENG-TNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEM 5762 K+NYKFL GSI+PRPIA V+T+ E+G T N APFSFF VS+ P I++ + ++ + G+ Sbjct: 12 KENYKFLTGSIIPRPIAFVTTLAEDGETVNAAPFSFFNVVSSDPAIVSIA--VQRADGKQ 69 Query: 5761 KDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILE 5582 KDT RN KE ++ VSE ++++N T+ L E L +K +I E Sbjct: 70 KDTARNAAFTKELNIHIVSESFVEEMNKTAARLAPDVSEIDKTSLHLEQVPGMKTPKISE 129 Query: 5581 SKIHFECIYRDHLSYGDQPG--CGQIITGEVVKVHVNEELLEEGR--IITENFKPVGRGA 5414 + I + + +I ++ +E+ +E I+ E +PV R A Sbjct: 130 ANIVLTAKLEQIIPIKNDADEVVSDLILARILTYDFADEVFDEKHHYILPEKLEPVARLA 189 Query: 5413 GNDWILCDHLIQRER 5369 GND+ + + ER Sbjct: 190 GNDYTKLGDIFRIER 204
>gi|15889046|ref|NP_354727.1| AGR_C_3198p [Agrobacterium tumefaciens] gi|17935636|ref|NP_532426.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] gi|25521034|pir||G97569 BH2278 hypothetical protein conserved protein (AP001515) [imported] - Agrobacterium tumefaciens (strain C58, Cereon) gi|25523475|pir||AH2790 conserved hypothetical protein Atu1743 [imported] - Agrobacterium tumefaciens (strain C58, Dupont) gi|15156841|gb|AAK87512.1| AGR_C_3198p [Agrobacterium tumefaciens str. C58 (Cereon)] gi|17740182|gb|AAL42742.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 205 Score = 97.4 bits (241), Expect = 4e-19 Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 3/176 (1%) Frame = -1 Query: 5908 ILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREK 5729 + PRPI + + G N++P+SFF A+S +P ++ FS S+G KD+ RN+ Sbjct: 21 VAPRPIGWIGSKGREGVLNLSPYSFFNAISDRPKLVMFS-----SSGR-KDSLRNVEETG 74 Query: 5728 EFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECIYRD 5549 F N VS ++D++N +S + Y DEF LAGLT +D +V A + E+ EC Sbjct: 75 VFTANLVSRHLVDRMNASSAPVAYDVDEFALAGLTAVDGRVVDAPFVREALAVLECRATQ 134 Query: 5548 HLSYGD---QPGCGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGNDWILCD 5390 D +P ++ G+V+ +H+ E ++ +GRI +PV R D+ CD Sbjct: 135 IQQLTDIEGKPTDSWMVIGQVMAIHIGETIIRDGRIDMGLARPVARMGYMDY--CD 188
>gi|17938392|ref|NP_535181.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] gi|25307458|pir||AC3135 conserved hypothetical protein Atu4703 [imported] - Agrobacterium tumefaciens (strain C58, Dupont) gi|17743206|gb|AAL45497.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 209 Score = 96.7 bits (239), Expect = 6e-19 Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 2/198 (1%) Frame = -1 Query: 5944 EFKDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGE 5765 E + Y+ L I PRPIA+V+T +E G NN AP SFF S P I+ K S GE Sbjct: 9 EPQSRYRLLTNFIGPRPIALVTTRSEAGHNNAAPMSFFNVFSHDPPIVVLGIQPKLS-GE 67 Query: 5764 MKDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRIL 5585 KDT NI R EFV+N V + DQ+ + DE +A LT + A Sbjct: 68 EKDTMVNIRRTGEFVINMVDMALSDQMLICGLGFDNEVDEMSMAQLTAKPCSKIDASYAA 127 Query: 5584 ESKIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELL-EEGRII-TENFKPVGRGAG 5411 +S FEC + Y + ++ GEVV +HV+ E L EEGR + + ++P+ R Sbjct: 128 QSPCAFECRVERLIGYPRR----TLVLGEVVHMHVHNECLDEEGRYVDPDRYQPIARLHA 183 Query: 5410 NDWILCDHLIQRERLMKA 5357 +++I D R+ ++KA Sbjct: 184 DNYITSD----RQFVLKA 197
>gi|32041690|ref|ZP_00139273.1| COG1853: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [Pseudomonas aeruginosa UCBPP-PA14] Length = 202 Score = 96.7 bits (239), Expect = 6e-19 Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 2/178 (1%) Frame = -1 Query: 5929 YKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTP 5750 Y++L ++ PRPIA VST++ G +N+APFSFF +S +P + + ++ G +KDT Sbjct: 14 YRWLASTVTPRPIAWVSTLSAEGASNLAPFSFFQVISDEPPTLMVNVSLRDD-GSLKDTL 72 Query: 5749 RNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIH 5570 RN+ + V++ V + +N TS LP+G E + G+ + S V RI + + Sbjct: 73 RNVQATGQLVIHLVGAAQAETMNATSAWLPHGVSEIETVGIPTVSSVRVAPPRIAAAAVA 132 Query: 5569 FECIYRDHLSY-GDQPGCGQIITGEVVKVHVNEELL-EEGRIITENFKPVGRGAGNDW 5402 FEC + Y + P C +I V+ HV++ +L +E + ++ VGR G+ + Sbjct: 133 FECEVAEIKPYPAENPNC-HLIFARVLLAHVDDAVLADERHVDSDRLDLVGRLGGSHY 189
>gi|15890290|ref|NP_355962.1| AGR_L_355p [Agrobacterium tumefaciens] gi|25307455|pir||A99153 hypothetical protein AGR_L_355 [imported] - Agrobacterium tumefaciens (strain C58, Cereon) gi|15158489|gb|AAK88747.1| AGR_L_355p [Agrobacterium tumefaciens str. C58 (Cereon)] Length = 212 Score = 96.7 bits (239), Expect = 6e-19 Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 2/198 (1%) Frame = -1 Query: 5944 EFKDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGE 5765 E + Y+ L I PRPIA+V+T +E G NN AP SFF S P I+ K S GE Sbjct: 12 EPQSRYRLLTNFIGPRPIALVTTRSEAGHNNAAPMSFFNVFSHDPPIVVLGIQPKLS-GE 70 Query: 5764 MKDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRIL 5585 KDT NI R EFV+N V + DQ+ + DE +A LT + A Sbjct: 71 EKDTMVNIRRTGEFVINMVDMALSDQMLICGLGFDNEVDEMSMAQLTAKPCSKIDASYAA 130 Query: 5584 ESKIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELL-EEGRII-TENFKPVGRGAG 5411 +S FEC + Y + ++ GEVV +HV+ E L EEGR + + ++P+ R Sbjct: 131 QSPCAFECRVERLIGYPRR----TLVLGEVVHMHVHNECLDEEGRYVDPDRYQPIARLHA 186 Query: 5410 NDWILCDHLIQRERLMKA 5357 +++I D R+ ++KA Sbjct: 187 DNYITSD----RQFVLKA 200
>gi|16119642|ref|NP_396348.1| AGR_pAT_605p [Agrobacterium tumefaciens] gi|17938998|ref|NP_535786.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] gi|25522003|pir||AH3210 conserved hypothetical protein Atu5415 [imported] - Agrobacterium tumefaciens (strain C58, Dupont) plasmid AT gi|15162214|gb|AAK90789.1| AGR_pAT_605p [Agrobacterium tumefaciens str. C58 (Cereon)] gi|17743866|gb|AAL46102.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 235 Score = 96.7 bits (239), Expect = 6e-19 Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 2/181 (1%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 ++ YK LIG+++PRPIA+V+T++ +G N PFSFF ++ P I+A + + K Sbjct: 30 RERYKILIGTVIPRPIALVTTVDRDGRPNAGPFSFFNVLTHDPAIVAIG-VENYADMRFK 88 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 DT RNI EF V+ ++DQ+ +++ G +E + AGL + +MV + R+L + Sbjct: 89 DTARNIRETGEFTVHICDNALVDQMEICAIKFGPGINEMEEAGLETVKGEMVCSPRVLAA 148 Query: 5578 KIHFECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEEG--RIITENFKPVGRGAGND 5405 EC L G +II GEVV V + + + I + VGR G+ Sbjct: 149 PAALECRRHTTLQVGP---AREIILGEVVGVFIRSDAVSASNLHIDQQMMDAVGRMGGHT 205 Query: 5404 W 5402 + Sbjct: 206 Y 206
>gi|21284305|ref|NP_647393.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|21205749|dbj|BAB96441.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 230 Score = 95.9 bits (237), Expect = 1e-18 Identities = 57/183 (31%), Positives = 101/183 (55%), Gaps = 5/183 (2%) Frame = -1 Query: 5911 SILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTG--EMKDTPRNIF 5738 S +PRPI +ST++++G +N+AP+S + ++ P ++ F+ +S G E KDT +N Sbjct: 22 STVPRPIGWISTVSKDGKDNLAPYSQYQNLTWDPPMVMFAAN-QSVLGDHERKDTVKNAE 80 Query: 5737 REKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECI 5558 FV N + D+ + +N +S LP EDEF AG+T R+ ES +HFEC Sbjct: 81 ETGWFVWNMATYDLREAVNLSSKALPPEEDEFNFAGVTKEKCIEAPGYRVKESPVHFECE 140 Query: 5557 YRD--HLSYGDQPGCGQIITGEVVKVHVNEE-LLEEGRIITENFKPVGRGAGNDWILCDH 5387 Y + GD I+ G V +VH++++ +L+ G++ ++ KP+ R D+ + + Sbjct: 141 YVQTIRIPTGDPVSTVDIVIGRVAQVHIDDKVILDNGKLDIKSIKPIARLGYYDYTVVNE 200 Query: 5386 LIQ 5378 + + Sbjct: 201 IFE 203
>gi|15925645|ref|NP_373179.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|15928241|ref|NP_375774.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|25507728|pir||G90073 conserved hypothetical protein SA2448 [imported] - Staphylococcus aureus (strain N315) gi|13702613|dbj|BAB43753.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14248430|dbj|BAB58817.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] Length = 230 Score = 95.5 bits (236), Expect = 1e-18 Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 5/183 (2%) Frame = -1 Query: 5911 SILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTG--EMKDTPRNIF 5738 S +PRPI +ST++++G +N+AP+S + ++ P ++ F+ +S G E KDT +N Sbjct: 22 STVPRPIGWISTVSKDGKDNLAPYSQYQNLTWDPPMVMFAAN-QSVLGDHERKDTVKNAE 80 Query: 5737 REKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECI 5558 FV N + D+ + +N +S LP EDEF+ AG+T R+ ES +HFEC Sbjct: 81 ETGWFVWNMATYDLREAVNLSSKALPPEEDEFEYAGVTKEACIEAPGYRVKESPVHFECE 140 Query: 5557 YRD--HLSYGDQPGCGQIITGEVVKVHVNEE-LLEEGRIITENFKPVGRGAGNDWILCDH 5387 Y + GD I+ G V +VH++++ +L+ G++ ++ KP+ R D+ + + Sbjct: 141 YVQTIRIPTGDPVSTVDIVIGRVAQVHIDDKVILDNGKLDIKSIKPIARLGYYDYTVVNE 200 Query: 5386 LIQ 5378 + + Sbjct: 201 IFE 203
>gi|27378509|ref|NP_770038.1| blr3398 [Bradyrhizobium japonicum] gi|27351657|dbj|BAC48663.1| blr3398 [Bradyrhizobium japonicum USDA 110] Length = 205 Score = 95.5 bits (236), Expect = 1e-18 Identities = 62/180 (34%), Positives = 91/180 (50%), Gaps = 4/180 (2%) Frame = -1 Query: 5929 YKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTP 5750 YK L ++ PRPIA V+T + +G N APFSFF + +P + + + G +KDT Sbjct: 14 YKILTATVTPRPIAWVTTRSRDGAANAAPFSFFNVLGHEPPTVVLGLLRHPNKG-LKDTA 72 Query: 5749 RNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIH 5570 +NI EFV + VS + + +N T+V+ P G DE ++AGL S MV I + Sbjct: 73 QNIVETGEFVAHLVSHQMAEAMNATAVDAPAGVDEMEIAGLQTCPSQMVAPPLIEGCPVA 132 Query: 5569 FECIYRDHLSYGDQPGCGQI-ITGEVVKVHVNEELL---EEGRIITENFKPVGRGAGNDW 5402 FEC + G QI + GE+V HV E+ + + G I T + R G+ W Sbjct: 133 FEC----RSLTVHETGPRQIAVIGEIVCAHVAEQFVIDAQRGYIDTVGLDLIARMHGSGW 188
>gi|15596841|ref|NP_250335.1| conserved hypothetical protein [Pseudomonas aeruginosa PA01] gi|11347817|pir||A83440 conserved hypothetical protein PA1644 [imported] - Pseudomonas aeruginosa (strain PAO1) gi|9947613|gb|AAG05033.1| conserved hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 202 Score = 95.5 bits (236), Expect = 1e-18 Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 2/178 (1%) Frame = -1 Query: 5929 YKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTP 5750 Y++L ++ PRPIA VST++ G +N+APFSFF +S +P + + ++ G +KDT Sbjct: 14 YRWLASTVTPRPIAWVSTLSAEGASNLAPFSFFQVISDEPPTLMVNVSLRDD-GSLKDTL 72 Query: 5749 RNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIH 5570 RN+ + V++ V + +N TS LP+G E + G+ + S V RI + + Sbjct: 73 RNVQATGQLVIHLVGAAQAETMNATSAWLPHGVSEIETVGIPTVSSVRVAPPRIAAAAVA 132 Query: 5569 FECIYRDHLSY-GDQPGCGQIITGEVVKVHVNEELL-EEGRIITENFKPVGRGAGNDW 5402 FEC + Y + P C +I V+ HV++ +L +E + + VGR G+ + Sbjct: 133 FECEVAEIKPYPAENPNC-HLIFARVLLAHVDDAVLADERHVDSARLDLVGRLGGSHY 189
>gi|13471042|ref|NP_102611.1| unknown protein [Mesorhizobium loti] gi|14021786|dbj|BAB48397.1| unknown protein [Mesorhizobium loti] Length = 202 Score = 95.1 bits (235), Expect = 2e-18 Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 4/184 (2%) Frame = -1 Query: 5908 ILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREK 5729 + PRPI +ST+N G N+AP+SFF AVS +P I+ F SS GE KD+ Sbjct: 20 VAPRPIGWISTLNGAGEINLAPYSFFNAVSTRPFIVWF-----SSEGE-KDSASFAQETG 73 Query: 5728 EFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFEC---- 5561 EFV N VS D+ +++N TSV P G +EF A L S +VK R+ + EC Sbjct: 74 EFVANLVSRDLAEKMNYTSVNAPRGVNEFVYADLAMAPSRLVKPPRVAAAPAALECRVTE 133 Query: 5560 IYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGNDWILCDHLI 5381 ++R G I+ GEVV VH+++ L++G V R D+ D + Sbjct: 134 VFRPKALDGTLTS-AVIVAGEVVGVHIDDAFLKDGLFDITKAGNVARLGYMDYASVDEVF 192 Query: 5380 QRER 5369 R Sbjct: 193 SMRR 196
>gi|28871435|ref|NP_794054.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854686|gb|AAO57749.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 207 Score = 94.7 bits (234), Expect = 2e-18 Identities = 63/178 (35%), Positives = 94/178 (52%), Gaps = 3/178 (1%) Frame = -1 Query: 5935 DNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKD 5756 D + ++G PRPI +S+ + NG N+AP+SFF A + P II F S G KD Sbjct: 19 DPFNAIVG---PRPIGWISSQDANGKLNLAPYSFFNAFNYVPPIIGFC-----SVGR-KD 69 Query: 5755 TPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESK 5576 + NI + EFV N + + + +N + + EF+LA LTP+ S +V R+LE+ Sbjct: 70 SLNNIEQTGEFVWNLATRSLAEAMNQSCAPVSPDVSEFELANLTPLKSQIVSVPRVLETP 129 Query: 5575 IHFECIYRD--HLSYGDQPGC-GQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAG 5411 + FEC L D+ +I GEVV VH+ + LL++G T +P+ RG G Sbjct: 130 VSFECKVTQIIQLQRADKELVPSWLILGEVVAVHIEKSLLKDGVYDTAAAEPILRGGG 187
>gi|22985341|ref|ZP_00030462.1| COG1853: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [Burkholderia fungorum] Length = 207 Score = 94.7 bits (234), Expect = 2e-18 Identities = 54/136 (39%), Positives = 71/136 (52%) Frame = -1 Query: 5938 KDNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 +D YK L +I+PRPIA V + + NG N APFSFF S P +I I G+ K Sbjct: 11 RDGYKLLSSTIVPRPIAWVVSADANGRLNAAPFSFFNLFSDDPPVICLG--IMGRAGQQK 68 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 DT NI EFVVN V E + Q+N T+ E +G DE + A L + RI ES Sbjct: 69 DTGANIRARGEFVVNLVPERLAHQMNATACEYEHGVDELQAADLATAPCPTIAIPRIAES 128 Query: 5578 KIHFECIYRDHLSYGD 5531 + ECI ++ G+ Sbjct: 129 PVALECIPMRYIELGN 144
>gi|23059441|ref|ZP_00084409.1| COG1853: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [Pseudomonas fluorescens PfO-1] Length = 209 Score = 94.4 bits (233), Expect = 3e-18 Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 3/178 (1%) Frame = -1 Query: 5935 DNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKD 5756 D + ++G PRPI +S+ + G N+AP+SFF A + P II FS S G KD Sbjct: 19 DPFNAIVG---PRPIGWISSQDAEGRLNLAPYSFFNAFNYIPPIIGFS-----SVGR-KD 69 Query: 5755 TPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESK 5576 + NI + EFV N + + +Q+N + + +EF+LAGLTP+ S ++ R+ ES Sbjct: 70 SLNNIEQTGEFVWNLATRPLAEQMNQSCAMVGPEVNEFELAGLTPVASKVIAVPRVAESP 129 Query: 5575 IHFECIYRDHLSYGDQPG---CGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAG 5411 + FEC + G ++ GEVV VH+ + LL++G T +P+ RG G Sbjct: 130 VSFECKVTQIIQLQRADGETVPSWLVLGEVVAVHIAKWLLKDGIYDTAAAEPILRGGG 187
>gi|27377536|ref|NP_769065.1| blr2425 [Bradyrhizobium japonicum] gi|27350680|dbj|BAC47690.1| blr2425 [Bradyrhizobium japonicum USDA 110] Length = 236 Score = 92.8 bits (229), Expect = 9e-18 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 3/166 (1%) Frame = -1 Query: 5908 ILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREK 5729 I PRPI +S+ + G N+AP+SFF A + P II FS + KDT NI + Sbjct: 55 IAPRPIGWISSRDTRGHVNLAPYSFFNAFAYVPPIIGFS------STNWKDTVENIKQTG 108 Query: 5728 EFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECIYRD 5549 EFV N + D+ +N T+ + DEF++AGLT + +V R+ ES + FEC D Sbjct: 109 EFVWNLATMDLARHMNATAAHVAPEVDEFEVAGLTAVPGKLVNVPRVAESPVAFECKVSD 168 Query: 5548 HLSYGDQPG---CGQIITGEVVKVHVNEELLEEGRIITENFKPVGR 5420 + G + GEVV VH+++ ++++G T +P+ R Sbjct: 169 IVRLKGADGREADAWLTLGEVVAVHIDKAMIKDGVYQTAAARPIVR 214
>gi|32470907|ref|NP_863900.1| conserved hypothetical protein [Pirellula sp. 1] gi|32443052|emb|CAD71573.1| conserved hypothetical protein [Pirellula sp.] Length = 216 Score = 92.8 bits (229), Expect = 9e-18 Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 1/174 (0%) Frame = -1 Query: 5929 YKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTP 5750 Y+ ++ I PRPIA VST++ +G N+AP+SFF V A P + F P + G KDT Sbjct: 33 YESMVALITPRPIAWVSTLSADGIANLAPYSFFGGVGANPPTVMFCP-VNRLDGTPKDTL 91 Query: 5749 RNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIH 5570 N+ +FVVN V+E+ + + ++ ++ EDEF L GL S V+ R+ + Sbjct: 92 ANVRANGQFVVNVVTEEFAETMKQSAADVRPDEDEFVLTGLQKAPSVKVEVPRVADVVAA 151 Query: 5569 FECIYRDHLSYGDQPGCGQIITGEVVKVHVNEELL-EEGRIITENFKPVGRGAG 5411 EC + G G ++ G +V +V + ++ + G E +GR G Sbjct: 152 MECEMLTSMQLGPGRGGANLVVGRIVSFYVADSVVGKNGLPDPEQIFTIGRMGG 205
>gi|26988132|ref|NP_743557.1| conserved hypothetical protein [Pseudomonas putida KT2440] gi|24982862|gb|AAN67021.1| conserved hypothetical protein [Pseudomonas putida KT2440] Length = 201 Score = 92.0 bits (227), Expect = 2e-17 Identities = 64/178 (35%), Positives = 92/178 (51%), Gaps = 3/178 (1%) Frame = -1 Query: 5935 DNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKD 5756 D + ++G PRPI +S+ + G N+AP+SFF A + P II F S G KD Sbjct: 15 DPFNAIVG---PRPIGWISSQDREGRLNLAPYSFFNAFNYIPPIIGFC-----SVGR-KD 65 Query: 5755 TPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESK 5576 + NI + EFV N + + +Q+N + + +EF+L+GLT S +VK R+ E+ Sbjct: 66 SLNNIEQTGEFVWNLATRPLAEQMNLSCAPVAAEVNEFELSGLTAAPSSIVKVPRVGETP 125 Query: 5575 IHFECIYRD--HLSYGDQPGC-GQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAG 5411 + FEC L DQ +I GEVV VH+ E LL G T +P+ RG G Sbjct: 126 VAFECKVSQIVQLKRADQEQVPSWLILGEVVAVHIAEHLLNNGIYDTAAAEPILRGGG 183
>gi|17987202|ref|NP_539836.1| NITRILOTRIACETATE MONOOXYGENASE COMPONENT B [Brucella melitensis] gi|25527015|pir||AI3366 nitrilotriacetate monooxygenase component b (EC 1.14.13.-) [imported] - Brucella melitensis (strain 16M) gi|17982872|gb|AAL52100.1| NITRILOTRIACETATE MONOOXYGENASE COMPONENT B [Brucella melitensis 16M] Length = 203 Score = 90.1 bits (222), Expect = 6e-17 Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 3/183 (1%) Frame = -1 Query: 5908 ILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREK 5729 + PRPI + T + G N+AP+SFF AV P PM+ S+ +KD+ I Sbjct: 20 VAPRPIGWIGTRSRKGAVNLAPYSFFNAVCDTP------PMVMFSSSGVKDSLVFIEETG 73 Query: 5728 EFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFECIYRD 5549 EF + VS+ + +N +SV+ P G +EF+ AGLT +V A + E+ EC+ + Sbjct: 74 EFTASLVSDHLKTHMNASSVDAPRGVNEFEYAGLTQAPGRLVGAPWVKEAYAALECVAVE 133 Query: 5548 HLSYGDQPG---CGQIITGEVVKVHVNEELLEEGRIITENFKPVGRGAGNDWILCDHLIQ 5378 D+ G ++ GEV+ VH+++ +L +G + KPV R D+ + Q Sbjct: 134 IRRLQDKEGRHTDNYMVIGEVIGVHIDDSVLTDGLVDISRAKPVARLGYMDYATTQSVYQ 193 Query: 5377 RER 5369 R Sbjct: 194 MYR 196
>gi|40746749|gb|EAA65905.1| hypothetical protein AN0876.2 [Aspergillus nidulans FGSC A4] Length = 324 Score = 89.4 bits (220), Expect = 1e-16 Identities = 47/125 (37%), Positives = 77/125 (61%), Gaps = 1/125 (0%) Frame = -1 Query: 5935 DNYKFLIGSILPRPIAVVSTINENG-TNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMK 5759 +NYK LI ++PRPIA++ST +++G T N+APFS+ ++ P + F+ S + K Sbjct: 128 NNYKLLISGMVPRPIALISTKSKDGKTENLAPFSYAQVINHDPPL--FTVGFVGSLEKAK 185 Query: 5758 DTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILES 5579 D+ RN+ E V+N +SE ++ N T+V PYG E++++GL S +V+A R+ ES Sbjct: 186 DSLRNLTETGECVINIISEHFVEAANATAVNAPYGVSEWEISGLHQAPSSIVQAARVKES 245 Query: 5578 KIHFE 5564 + E Sbjct: 246 MLSIE 250
>gi|39937225|ref|NP_949501.1| conserved hypothetical protein [Rhodopseudomonas palustris] gi|39651083|emb|CAE29606.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 231 Score = 89.4 bits (220), Expect = 1e-16 Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 1/158 (0%) Frame = -1 Query: 5935 DNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKD 5756 D Y+ + +I+PRPIA V T + +G N AP+SFF + ++A + + KD Sbjct: 29 DRYRLMASTIMPRPIAWVVTRSPDGCINAAPYSFFNMFGSDRPVVALGILARPDAP--KD 86 Query: 5755 TPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESK 5576 T NI EFV+N V +++ +N T VE P DE LAGL + S + RI S Sbjct: 87 TAANIRATGEFVINLVPFSLVESMNATCVEAPPEVDELDLAGLESLPSVAIAPPRIAASP 146 Query: 5575 IHFECIYRDHLSYGDQPGCGQI-ITGEVVKVHVNEELL 5465 + FEC L G GQ+ + GEV+ H +++L Sbjct: 147 VAFECRRTHWLDTGP----GQVMVVGEVLHAHYAQDVL 180
>gi|22961350|ref|ZP_00008956.1| COG1853: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [Rhodopseudomonas palustris] Length = 322 Score = 89.4 bits (220), Expect = 1e-16 Identities = 55/158 (34%), Positives = 81/158 (51%), Gaps = 1/158 (0%) Frame = -1 Query: 5935 DNYKFLIGSILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKD 5756 D Y+ + +I+PRPIA V T + +G N AP+SFF + ++A + + KD Sbjct: 120 DRYRLMASTIMPRPIAWVVTRSPDGCINAAPYSFFNMFGSDRPVVALGILARPDAP--KD 177 Query: 5755 TPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESK 5576 T NI EFV+N V +++ +N T VE P DE LAGL + S + RI S Sbjct: 178 TAANIRATGEFVINLVPFSLVESMNATCVEAPPEVDELDLAGLESLPSVAIAPPRIAASP 237 Query: 5575 IHFECIYRDHLSYGDQPGCGQI-ITGEVVKVHVNEELL 5465 + FEC L G GQ+ + GEV+ H +++L Sbjct: 238 VAFECRRTHWLDTGP----GQVMVVGEVLHAHYAQDVL 271
>gi|22983855|ref|ZP_00029022.1| COG1853: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [Burkholderia fungorum] Length = 216 Score = 89.0 bits (219), Expect = 1e-16 Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 4/167 (2%) Frame = -1 Query: 5908 ILPRPIAVVSTINENGTNNVAPFSFFTAVSAKPMIIAFSPMIKSSTGEMKDTPRNIFREK 5729 + PR I +S+ + GT N+AP+SFF A + P II F S G KD+ NI Sbjct: 36 VAPRLIGWISSRDTEGTLNLAPYSFFGAFATFPPIIGFC-----SEGR-KDSVTNIEATG 89 Query: 5728 EFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPIDSDMVKAKRILESKIHFEC---- 5561 EFV N ++ + +Q+N +S +P DEF+LAGLTP V + ES EC Sbjct: 90 EFVWNLANKPLAEQMNRSSAPVPPSVDEFELAGLTPAPGRNVAVPHVAESPAALECKLLQ 149 Query: 5560 IYRDHLSYGDQPGCGQIITGEVVKVHVNEELLEEGRIITENFKPVGR 5420 + R H G P + G+VV VH+NE L++G T +P+ R Sbjct: 150 VVRLHTLDG-TPMDNYLSLGQVVGVHINEAYLKDGLFDTHAAQPIMR 195
>gi|32403418|ref|XP_322322.1| hypothetical protein [Neurospora crassa] gi|28918802|gb|EAA28471.1| hypothetical protein [Neurospora crassa] Length = 315 Score = 88.2 bits (217), Expect = 2e-16 Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 11/185 (5%) Frame = -1 Query: 5932 NYKFLIGSILPRPIAVVSTINENG-TNNVAPFSFFTAVSAKPMIIAF---SPMIKSSTGE 5765 NYK LI +I+PRPIA+VST + +G T N+APFS+F +S P + SP+ +S Sbjct: 92 NYKLLISAIVPRPIALVSTRSADGTTENLAPFSYFQVISHDPPLFTLGFASPLTPAS--R 149 Query: 5764 MKDTPRNIFREKEFVVNFVSEDIIDQINTTSVELPYGEDEFKLAGLTPI-DSDMVKAKRI 5588 KD+ R + E V+N +S ++ N+ S P G E+ ++GLTP+ D+ VKA R Sbjct: 150 AKDSLRILHETGECVINLMSTPFLEAANSCSTNAPLGVSEWVISGLTPVYDTQTVKAARA 209 Query: 5587 LESKIHFEC--IYRDHLSYGDQPG--CGQIITGEVVKVHVNEELLEE--GRIITENFKPV 5426 E+ EC ++ +PG ++ E K + E + E ++ + +KPV Sbjct: 210 KEAVFAVECKLVHVKEFESRSKPGETGSTLVVVEGTKFWIKEGAVNEELNQMDLDVYKPV 269 Query: 5425 GRGAG 5411 R G Sbjct: 270 SRLGG 274
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Jan 12, 2004 2:58 AM Number of letters in database: 527,787,770 Number of sequences in database: 1,604,661 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,620,072 Number of Sequences: 1604661 Number of extensions: 1545851 Number of successful extensions: 4146 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3956 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4134 length of database: 527,787,770 effective HSP length: 125 effective length of database: 327,205,145 effective search space used: 71657926755 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)