Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1073990137-5630-19587898728.BLASTQ4 Query= vorax50d06_10000_19999 (10000 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,604,661 sequences; 527,787,770 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
RID: 1073990137-5630-19587898728.BLASTQ4
Query= vorax50d06_10000_19999 (10000 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,604,661 sequences; 527,787,770 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Score E Sequences producing significant alignments: (bits) Value gi|23056135|ref|ZP_00082192.1| COG0688: Phosphatidylserine ... 48 4e-04 gi|21398204|ref|NP_654189.1| Peptidase_M22, Glycoprotease f... 47 0.001 gi|30018507|ref|NP_830138.1| Glycoprotease protein family [... 44 0.004 gi|23098101|ref|NP_691567.1| glycoprotein endopeptidase [Oc... 44 0.008 gi|34540716|ref|NP_905195.1| phosphatidylserine decarboxyla... 42 0.022 gi|16077659|ref|NP_388473.1| similar to glycoprotein endope... 41 0.038 gi|27262292|gb|AAN87427.1| glycoprotease protein family mem... 41 0.049 gi|30249371|ref|NP_841441.1| Glycoprotease, (M22) metallo-p... 40 0.11 gi|22977091|ref|ZP_00022917.1| COG0688: Phosphatidylserine ... 40 0.11 gi|40063129|gb|AAR37976.1| glycoprotease family protein [un... 39 0.14 gi|23473620|ref|ZP_00128916.1| COG0688: Phosphatidylserine ... 39 0.14 gi|32035349|ref|ZP_00135338.1| COG1214: Inactive homolog of... 38 0.32 gi|39997006|ref|NP_952957.1| phosphatidylserine decarboxyla... 37 0.55 gi|16760710|ref|NP_456327.1| conserved hypothetical protein... 37 0.55 gi|18311147|ref|NP_563081.1| probable glycoprotein endopept... 37 0.55 gi|15792440|ref|NP_282263.1| putative membrane protein [Cam... 37 0.55 gi|39938987|ref|NP_950753.1| conserved hypothetical protein... 37 0.71 gi|40063234|gb|AAR38061.1| glycoprotease family protein [un... 37 0.71 gi|34498907|ref|NP_903122.1| conserved hypothetical protein... 37 0.93 gi|23002945|ref|ZP_00046616.1| COG2190: Phosphotransferase ... 36 1.2 gi|15802220|ref|NP_288243.1| orf, hypothetical protein [Esc... 36 1.2 gi|16129761|ref|NP_416321.1| hypothetical protein b1807 [Es... 36 1.2 gi|26248065|ref|NP_754105.1| Hypothetical protease yeaZ [Es... 36 1.2 gi|16272336|ref|NP_438549.1| unknown protein [Haemophilus i... 36 1.2 gi|19075190|ref|NP_587690.1| hypothetical protein. [Schizos... 36 1.2 gi|37526048|ref|NP_929392.1| hypothetical protein [Photorha... 35 2.1 gi|16801248|ref|NP_471516.1| similar to glycoprotease [List... 35 2.1 gi|24212739|ref|NP_710220.1| conserved hypothetical protein... 35 2.1 gi|23111907|ref|ZP_00097468.1| COG1214: Inactive homolog of... 35 2.1 gi|16804116|ref|NP_465601.1| similar to glycoprotease [List... 35 2.7 gi|33152534|ref|NP_873887.1| conserved hypothetical protein... 35 2.7 gi|13357872|ref|NP_078146.1| conserved hypothetical [Ureapl... 35 2.7 gi|19703690|ref|NP_603252.1| Phosphatidylserine decarboxyla... 35 3.5 gi|15602574|ref|NP_245646.1| unknown [Pasteurella multocida... 35 3.5 gi|21283704|ref|NP_646792.1| ORFID:MW1975~hypothetical prot... 35 3.5 gi|23003734|ref|ZP_00047385.1| COG1214: Inactive homolog of... 34 4.6 gi|15896094|ref|NP_349443.1| Inactive homolog of metal-depe... 34 4.6 gi|34763769|ref|ZP_00144686.1| Phosphatidylserine decarboxy... 34 4.6 gi|21233244|ref|NP_639161.1| O-sialoglycoprotein endopeptid... 34 4.6 gi|15613109|ref|NP_241412.1| glycoprotein endopeptidase [Ba... 34 4.6 gi|1143292|gb|AAA92893.1| L2 capsid protein 34 4.6 gi|31544412|ref|NP_852990.1| conserved hypothetical [Mycopl... 34 4.6 gi|9627116|ref|NP_041339.1| minor capsid protein [Human pap... 34 6.0 gi|22985248|ref|ZP_00030372.1| COG1214: Inactive homolog of... 34 6.0 gi|21244595|ref|NP_644177.1| O-sialoglycoprotein endopeptid... 33 7.9 gi|15641991|ref|NP_231623.1| conserved hypothetical protein... 33 7.9 gi|12045060|ref|NP_072870.1| conserved hypothetical protein... 33 7.9 gi|21634569|gb|AAM69416.1| maturase K [Euryops virgineus] 33 7.9 gi|30249301|ref|NP_841371.1| psd, phosphatidylserine decarb... 33 7.9 gi|28828134|gb|AAO50817.1| similar to reverse transcriptase... 33 7.9 gi|21672591|ref|NP_660658.1| hypothetical 25.2 kDa protein ... 33 7.9 gi|15925041|ref|NP_372575.1| hypothetical protein [Staphylo... 33 7.9 gi|27363623|ref|NP_759151.1| Inactive homolog of metal-depe... 33 7.9 gi|37679233|ref|NP_933842.1| inactive homolog of metal-depe... 33 7.9 gi|29654668|ref|NP_820360.1| protease, putative [Coxiella b... 33 7.9 Alignments
Score E Sequences producing significant alignments: (bits) Value gi|23056135|ref|ZP_00082192.1| COG0688: Phosphatidylserine ... 48 4e-04 gi|21398204|ref|NP_654189.1| Peptidase_M22, Glycoprotease f... 47 0.001 gi|30018507|ref|NP_830138.1| Glycoprotease protein family [... 44 0.004 gi|23098101|ref|NP_691567.1| glycoprotein endopeptidase [Oc... 44 0.008 gi|34540716|ref|NP_905195.1| phosphatidylserine decarboxyla... 42 0.022 gi|16077659|ref|NP_388473.1| similar to glycoprotein endope... 41 0.038 gi|27262292|gb|AAN87427.1| glycoprotease protein family mem... 41 0.049 gi|30249371|ref|NP_841441.1| Glycoprotease, (M22) metallo-p... 40 0.11 gi|22977091|ref|ZP_00022917.1| COG0688: Phosphatidylserine ... 40 0.11 gi|40063129|gb|AAR37976.1| glycoprotease family protein [un... 39 0.14 gi|23473620|ref|ZP_00128916.1| COG0688: Phosphatidylserine ... 39 0.14 gi|32035349|ref|ZP_00135338.1| COG1214: Inactive homolog of... 38 0.32 gi|39997006|ref|NP_952957.1| phosphatidylserine decarboxyla... 37 0.55 gi|16760710|ref|NP_456327.1| conserved hypothetical protein... 37 0.55 gi|18311147|ref|NP_563081.1| probable glycoprotein endopept... 37 0.55 gi|15792440|ref|NP_282263.1| putative membrane protein [Cam... 37 0.55 gi|39938987|ref|NP_950753.1| conserved hypothetical protein... 37 0.71 gi|40063234|gb|AAR38061.1| glycoprotease family protein [un... 37 0.71 gi|34498907|ref|NP_903122.1| conserved hypothetical protein... 37 0.93 gi|23002945|ref|ZP_00046616.1| COG2190: Phosphotransferase ... 36 1.2 gi|15802220|ref|NP_288243.1| orf, hypothetical protein [Esc... 36 1.2 gi|16129761|ref|NP_416321.1| hypothetical protein b1807 [Es... 36 1.2 gi|26248065|ref|NP_754105.1| Hypothetical protease yeaZ [Es... 36 1.2 gi|16272336|ref|NP_438549.1| unknown protein [Haemophilus i... 36 1.2 gi|19075190|ref|NP_587690.1| hypothetical protein. [Schizos... 36 1.2 gi|37526048|ref|NP_929392.1| hypothetical protein [Photorha... 35 2.1 gi|16801248|ref|NP_471516.1| similar to glycoprotease [List... 35 2.1 gi|24212739|ref|NP_710220.1| conserved hypothetical protein... 35 2.1 gi|23111907|ref|ZP_00097468.1| COG1214: Inactive homolog of... 35 2.1 gi|16804116|ref|NP_465601.1| similar to glycoprotease [List... 35 2.7 gi|33152534|ref|NP_873887.1| conserved hypothetical protein... 35 2.7 gi|13357872|ref|NP_078146.1| conserved hypothetical [Ureapl... 35 2.7 gi|19703690|ref|NP_603252.1| Phosphatidylserine decarboxyla... 35 3.5 gi|15602574|ref|NP_245646.1| unknown [Pasteurella multocida... 35 3.5 gi|21283704|ref|NP_646792.1| ORFID:MW1975~hypothetical prot... 35 3.5 gi|23003734|ref|ZP_00047385.1| COG1214: Inactive homolog of... 34 4.6 gi|15896094|ref|NP_349443.1| Inactive homolog of metal-depe... 34 4.6 gi|34763769|ref|ZP_00144686.1| Phosphatidylserine decarboxy... 34 4.6 gi|21233244|ref|NP_639161.1| O-sialoglycoprotein endopeptid... 34 4.6 gi|15613109|ref|NP_241412.1| glycoprotein endopeptidase [Ba... 34 4.6 gi|1143292|gb|AAA92893.1| L2 capsid protein 34 4.6 gi|31544412|ref|NP_852990.1| conserved hypothetical [Mycopl... 34 4.6 gi|9627116|ref|NP_041339.1| minor capsid protein [Human pap... 34 6.0 gi|22985248|ref|ZP_00030372.1| COG1214: Inactive homolog of... 34 6.0 gi|21244595|ref|NP_644177.1| O-sialoglycoprotein endopeptid... 33 7.9 gi|15641991|ref|NP_231623.1| conserved hypothetical protein... 33 7.9 gi|12045060|ref|NP_072870.1| conserved hypothetical protein... 33 7.9 gi|21634569|gb|AAM69416.1| maturase K [Euryops virgineus] 33 7.9 gi|30249301|ref|NP_841371.1| psd, phosphatidylserine decarb... 33 7.9 gi|28828134|gb|AAO50817.1| similar to reverse transcriptase... 33 7.9 gi|21672591|ref|NP_660658.1| hypothetical 25.2 kDa protein ... 33 7.9 gi|15925041|ref|NP_372575.1| hypothetical protein [Staphylo... 33 7.9 gi|27363623|ref|NP_759151.1| Inactive homolog of metal-depe... 33 7.9 gi|37679233|ref|NP_933842.1| inactive homolog of metal-depe... 33 7.9 gi|29654668|ref|NP_820360.1| protease, putative [Coxiella b... 33 7.9
>gi|23056135|ref|ZP_00082192.1| COG0688: Phosphatidylserine decarboxylase [Geobacter metallireducens] Length = 243 Score = 47.8 bits (112), Expect = 4e-04 Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 19/201 (9%) Frame = +2 Query: 599 ALLLMLIIGVWG-----FLFAALVYGIL--FAIFRKQKEDFRKDSNENVIVSPVNGRVYK 757 A+L+ +++ V G F F A+ +G L F +F + + ++EN +++P +G V Sbjct: 44 AVLIAVVLAVLGSKIPAFFFLAVFFGALTLFIVFFFRNPERTTPADENAVIAPADGVVIY 103 Query: 758 IEKNVDHEFFGKDMTSVLI----------QVPFWKEFGLFFPVKSEIHDVQASCDSCLDH 907 + + + E G++MT + I +VP + F +K + DV+ + + Sbjct: 104 LGPSRE-EHLGEEMTKISIFMSVFNVHVNRVPITGKVLDTFYIKGKFLDVRDDRATFENE 162 Query: 908 LVKFRLVNGMDIGLAVGQNILRLAPQIM--VLPGDRGKQKVNFGFLPMGGEVRVFIPSAL 1081 + + + V Q +A +I+ GD+ + +G + G + V++PS Sbjct: 163 QAGLIIETAKGMKMIVVQVAGLIARRIVCYAAKGDQLVRGKRYGLIRFGSRLDVYLPSET 222 Query: 1082 EVLINEKDEVVAGQGILAGIP 1144 V + D+ VAG+ IL +P Sbjct: 223 AVRVRMGDKTVAGETILGLLP 243
>gi|21398204|ref|NP_654189.1| Peptidase_M22, Glycoprotease family [Bacillus anthracis A2012] gi|30260435|ref|NP_842812.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gi|30253756|gb|AAP24298.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 230 Score = 46.6 bits (109), Expect = 0.001 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPIYSFYHFSVPFIL 201 V LL++ +K KE+ + AGPGSYTG+RI A+ L W IPI V Sbjct: 43 VEQLLKECGVKPKELTKIVVAAGPGSYTGVRIGVTAAKTLAWSLQIPIVGVSSLEVVAAN 102 Query: 202 GIERGAWVSKAF---KGEIF--LYEWRGEKVEKSLHSEKDLSSLQE 324 G +S F +G+I+ LY + GE DL+S++E Sbjct: 103 GANFNGLISPLFDGRRGQIYTGLYTYEGE----------DLTSIEE 138
>gi|30018507|ref|NP_830138.1| Glycoprotease protein family [Bacillus cereus ATCC 14579] gi|29894047|gb|AAP07339.1| Glycoprotease protein family [Bacillus cereus ATCC 14579] Length = 230 Score = 44.3 bits (103), Expect = 0.004 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPIYSFYHFSVPFIL 201 V LL++ +K KE+ + AGPGSYTG+RI A+ L W IPI V Sbjct: 43 VEKLLKECGVKPKELTKIVVAAGPGSYTGVRIGVTAAKTLAWSLQIPIVGVSSLEVVAAN 102 Query: 202 GIERGAWVSKAF---KGEIF--LYEWRGEKV 279 G + F +G+I+ LY + GE++ Sbjct: 103 GANFNGLICPLFDGRRGQIYTGLYTYEGEQL 133
>gi|23098101|ref|NP_691567.1| glycoprotein endopeptidase [Oceanobacillus iheyensis HTE831] gi|22776326|dbj|BAC12602.1| glycoprotein endopeptidase [Oceanobacillus iheyensis HTE831] Length = 235 Score = 43.5 bits (101), Expect = 0.008 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 14/158 (8%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPIYSFYHFSVPFIL 201 V SL+++ +++ +E+ + GPGSYTG+RI A+ + W +IP+ V Sbjct: 43 VESLMQQVSMQPEELDRIVVAKGPGSYTGVRIGLSTAKTMAWALEIPVVGVSSLEVLAYQ 102 Query: 202 GIERGAWVSKAF---KGEIFL--YEWRGEKVEKSLHSEKDL-SSLQEKLSPELGEFWTHF 363 G + F +G +F Y++ K+EK + E L +S+ +KL + GE Sbjct: 103 GKFFSGIICPFFDARRGLVFTGGYQFNDNKIEKVIEEENLLMTSMLDKLKKQ-GEKVVFL 161 Query: 364 DGVIDQISRSSAQLIKEK-------PEEVFSYVAESQL 456 I+Q +LIKE+ PE ++ S L Sbjct: 162 SPDIEQFK----ELIKEELGDLAIIPEPIYHLPKASHL 195
>gi|34540716|ref|NP_905195.1| phosphatidylserine decarboxylase-related protein [Porphyromonas gingivalis W83] gi|34397030|gb|AAQ66094.1| phosphatidylserine decarboxylase-related protein [Porphyromonas gingivalis W83] Length = 221 Score = 42.0 bits (97), Expect = 0.022 Identities = 40/204 (19%), Positives = 82/204 (40%), Gaps = 17/204 (8%) Frame = +2 Query: 584 CITFVALLLMLIIGVWGFLFAALVYGILFAIFRKQKEDFRKDSNENVIVSPVNGRVYKIE 763 C++ L I+ + A +Y + FR K +++ +V+P +G++ IE Sbjct: 22 CLSLFYFLGASIVSYLVMIIAIFLYLLTINFFRCPKRHSPFANDDRAVVAPADGKIVAIE 81 Query: 764 KNVDHEFFGKDMTSVLIQVPFWKEFGLFFPVKSEIHDV-------------QASCDSCLD 904 + ++E + V I + + +FP + ++ V ++S D+ Sbjct: 82 EVSENEILHERCIQVSIFMSIFNVHANWFPCEGKVTHVSHKNGHFIAAYLPKSSTDNERS 141 Query: 905 HLV----KFRLVNGMDIGLAVGQNILRLAPQIMVLPGDRGKQKVNFGFLPMGGEVRVFIP 1072 +V K + I A+ + I+ A GD + GF+ G V V++P Sbjct: 142 AIVIKTEKGARILARQIAGALARRIVTYAE-----VGDICSVDAHMGFIKFGSRVDVYLP 196 Query: 1073 SALEVLINEKDEVVAGQGILAGIP 1144 +V + + V Q ++A +P Sbjct: 197 LGSQVEVKMDQKTVGNQTLIARLP 220
>gi|16077659|ref|NP_388473.1| similar to glycoprotein endopeptidase [Bacillus subtilis] gi|7474864|pir||D69786 glycoprotein endopeptidase homolog ydiC - Bacillus subtilis gi|1945108|dbj|BAA19716.1| H. influenzae hypothetical protein; P43990 (182) [Bacillus subtilis] gi|2632905|emb|CAB12411.1| ydiC [Bacillus subtilis subsp. subtilis str. 168] Length = 229 Score = 41.2 bits (95), Expect = 0.038 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 11/117 (9%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPIYSFYHFSVPFIL 201 V+SLL ++ +++ + GPGSYTG+RI +A+ L W DIPI + Sbjct: 43 VHSLLNDCDMAPQDLSKIVVAKGPGSYTGVRIGVTLAKTLAWSLDIPISAVSSLETLAAN 102 Query: 202 GIERGAWVSKAF---KGEIF--LYEWRGEKVEKSLHSEKD-----LSSLQEKLSPEL 342 G +S F +G+++ LY+++ +E+ + + L L+EK P L Sbjct: 103 GRHFDGLISPIFDARRGQVYTGLYQYKNGLLEQVVPDQNVMLADWLEMLKEKDRPVL 159
>gi|27262292|gb|AAN87427.1| glycoprotease protein family member [Heliobacillus mobilis] Length = 252 Score = 40.8 bits (94), Expect = 0.049 Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%) Frame = +1 Query: 34 LLEKRNLKIKEVQGLFQVAGPGSYTGMRIS----EGMAQVLEWQDIPIYSFYHFSVPFIL 201 L L ++++ GL GPGS+TG+RI +GMAQ L +PI VP + Sbjct: 46 LFSLAGLTLQDMHGLAIATGPGSFTGLRIGMATIKGMAQPL---GLPI-----VGVPTLD 97 Query: 202 GIERGAW--------VSKAFKGEIF--LYEWRGEKVEKSLHSEKDLSSLQ-EKLSPELGE 348 + R AW + A K E++ LY E++EK D ++ EKL +L Sbjct: 98 ALARNAWPYEGIVCPILDARKSEVYTCLYRSGPEEMEK----VTDYQAIHPEKLMEQLRS 153 Query: 349 FW 354 +W Sbjct: 154 YW 155
>gi|30249371|ref|NP_841441.1| Glycoprotease, (M22) metallo-protease family [Nitrosomonas europaea ATCC 19718] gi|30180690|emb|CAD85311.1| Glycoprotease, (M22) metallo-protease family [Nitrosomonas europaea ATCC 19718] Length = 223 Score = 39.7 bits (91), Expect = 0.11 Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 1/46 (2%) Frame = +1 Query: 31 SLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEW-QDIPI 165 +LL + + + ++ G+ AGPGS+TG+RI+ G+ Q L + QDIP+ Sbjct: 44 TLLTEAGIALNQIDGIAFGAGPGSFTGLRIACGVTQGLAFAQDIPV 89
>gi|22977091|ref|ZP_00022917.1| COG0688: Phosphatidylserine decarboxylase [Ralstonia metallidurans] Length = 217 Score = 39.7 bits (91), Expect = 0.11 Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 16/198 (8%) Frame = +2 Query: 596 VALLLMLIIGVWGFLFAALVYGILFAIFRKQKEDFRKDSNENVIVSPVNGRVYKIEKNVD 775 V++L+ + G WG L +V + FR S N I++P +GR+ +EK D Sbjct: 22 VSVLVHISAGFWGALPLWIVTLFVLQFFRDPPRPI--PSAPNAILAPADGRIVVVEKTQD 79 Query: 776 HEFFGKDMTSVLIQVPFWKEFGL---------------FFPVKSEIHDV-QASCDSCLDH 907 + G++ + + F F + +FP K D+ +AS ++ + Sbjct: 80 -PYAGREALKISV---FMNVFNVHSNRSSLDGKVEKLEYFPGKFVNADLDKASMENERNA 135 Query: 908 LVKFRLVNGMDIGLAVGQNILRLAPQIMVLPGDRGKQKVNFGFLPMGGEVRVFIPSALEV 1087 +V R +G + L ++ + GD + +GF+ G V V++P+ Sbjct: 136 VVIRRASDGQVVTLVQVAGLVARRILCYINVGDMLSRGQRYGFIRFGSRVDVYLPTDARP 195 Query: 1088 LINEKDEVVAGQGILAGI 1141 + ++V A +LA + Sbjct: 196 RVTIGEKVSASATVLADL 213
>gi|40063129|gb|AAR37976.1| glycoprotease family protein [uncultured bacterium 561] Length = 236 Score = 39.3 bits (90), Expect = 0.14 Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 3/54 (5%) Frame = +1 Query: 22 HVYSLLEK--RNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPIYSF 174 H+ ++L++ + ++G+ GPGS+TG+R++ G+AQ L W ++P+ F Sbjct: 38 HILAMLDEVMAGQALTAIEGIICGVGPGSFTGLRVATGVAQGLAWSLNVPVIPF 91
>gi|23473620|ref|ZP_00128916.1| COG0688: Phosphatidylserine decarboxylase [Desulfovibrio desulfuricans G20] Length = 229 Score = 39.3 bits (90), Expect = 0.14 Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 14/197 (7%) Frame = +2 Query: 587 ITFVALLLMLIIGVWGFLFAALVYGIL--FAIFRKQKEDFRKDSNENVIVSPVNGRVYKI 760 +T +A L+ II W F A+V+ +L F++ + + S VSP +GR+ K+ Sbjct: 29 LTALAALVFAIIDCW---FMAVVFLLLCWFSVHFFRDPERVVPSAPGAGVSPADGRIIKV 85 Query: 761 EKNVDHEFFGKDMTSVLIQVPFWKEFGLFFPVKSEIHDV--------QASCD--SCLDHL 910 + D F G+ V I + + FPV + + AS D S + Sbjct: 86 QPMPD-PFTGEPRMCVCIFMNVFNVHVNRFPVSGTVQSIAYHPGKYFNASWDKASTDNER 144 Query: 911 VKFRLVNGMDIGLAVGQNILRLAPQIM--VLPGDRGKQKVNFGFLPMGGEVRVFIPSALE 1084 + +V+ + ++ Q +A +I+ V GD ++ G + G V V++P E Sbjct: 145 CAYDIVDADGLRWSMVQIAGLIARRIVCRVEEGDTLRRGERCGMIRFGSRVDVYLPEEYE 204 Query: 1085 VLINEKDEVVAGQGILA 1135 + + V AGQ +LA Sbjct: 205 PKVTVGETVFAGQTVLA 221
>gi|32035349|ref|ZP_00135338.1| COG1214: Inactive homolog of metal-dependent proteases, putative molecular chaperone [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 230 Score = 38.1 bits (87), Expect = 0.32 Identities = 18/37 (48%), Positives = 25/37 (67%) Frame = +1 Query: 34 LLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVL 144 LL + N+ IK+V L GPGS+TG+R+ G+AQ L Sbjct: 47 LLAQANISIKQVDALVFGRGPGSFTGVRVGVGIAQGL 83
>gi|39997006|ref|NP_952957.1| phosphatidylserine decarboxylase, putative [Geobacter sulfurreducens PCA] gi|39983894|gb|AAR35284.1| phosphatidylserine decarboxylase, putative [Geobacter sulfurreducens PCA] Length = 218 Score = 37.4 bits (85), Expect = 0.55 Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 15/188 (7%) Frame = +2 Query: 626 VWGFLFAALVYGILFAIFRKQKEDFRKDSNENVIVSPVNGRVYKIEKNVDHEFFGKDMTS 805 VW L + A F + E NEN +V+P +G V + E G + T Sbjct: 36 VWAGTAFFLTVTLFVAFFFRNPERITP-GNENAVVAPADGVVIYLGP-AREEHLGVETTK 93 Query: 806 VLIQVPFWKEFGLF-------------FPVKSEIHDVQASCDSCLDHLVKFRLVNGMDIG 946 + I F F + F VK + DV+ + + + + Sbjct: 94 ISI---FMSVFNVHINRAPVSGTVLDTFYVKGKFLDVRDDRATFENEQAGLVIETARGLR 150 Query: 947 LAVGQNILRLAPQIMVLPG--DRGKQKVNFGFLPMGGEVRVFIPSALEVLINEKDEVVAG 1120 LAV Q +A +I+ G DR + +G + G + +++P+ EV + ++ VAG Sbjct: 151 LAVVQVAGLIARRIVCYAGKGDRLTRGGRYGLIRFGSRLDIYLPTTTEVKVALGEKTVAG 210 Query: 1121 QGILAGIP 1144 + +L +P Sbjct: 211 ETVLGILP 218
>gi|16760710|ref|NP_456327.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|16765161|ref|NP_460776.1| putative molecular chaperone [Salmonella typhimurium LT2] gi|29141532|ref|NP_804874.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi Ty2] gi|25306288|pir||AE0725 conserved hypothetical protein STY1950 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16420352|gb|AAL20735.1| putative molecular chaperone [Salmonella typhimurium LT2] gi|16503007|emb|CAD05503.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137159|gb|AAO68723.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi Ty2] Length = 231 Score = 37.4 bits (85), Expect = 0.55 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 19/130 (14%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLE-WQDIPIYSFYHFSVPFIL 201 V +L + E+ L GPGS+TG+RI G+AQ L ++P+ V + Sbjct: 42 VQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPM-----IGVSTLA 96 Query: 202 GIERGAW----------VSKAFKGEIFLYE--------WRGEKVEKSLHSEKDLSSLQEK 327 + +GAW A GE++ E W+GE+ E L E+ + E+ Sbjct: 97 TMAQGAWRKTGATRVLAAIDARMGEVYWAEYQRDAQGVWQGEETEAVLKPER----VGER 152 Query: 328 LSPELGEFWT 357 L GE+ T Sbjct: 153 LKQLSGEWAT 162
>gi|18311147|ref|NP_563081.1| probable glycoprotein endopeptidase [Clostridium perfringens] gi|18145830|dbj|BAB81871.1| probable glycoprotein endopeptidase [Clostridium perfringens str. 13] Length = 234 Score = 37.4 bits (85), Expect = 0.55 Identities = 20/36 (55%), Positives = 25/36 (69%) Frame = +1 Query: 34 LLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQV 141 LL+ NLKIK++ G GPGS+TG+RI GMA V Sbjct: 46 LLKYNNLKIKDLDGFAISEGPGSFTGLRI--GMATV 79
>gi|15792440|ref|NP_282263.1| putative membrane protein [Campylobacter jejuni] gi|11347011|pir||F81315 probable membrane protein Cj1115c [imported] - Campylobacter jejuni (strain NCTC 11168) gi|6968549|emb|CAB73370.1| putative membrane protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 205 Score = 37.4 bits (85), Expect = 0.55 Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 11/202 (5%) Frame = +2 Query: 548 MGLTYLPKWIYSCITFVALLLMLIIGVWGFLFAALVYGILFAIFRKQKEDFRKDSNENVI 727 + L ++ WI+ +F LLL LI+ I +FR K + S+E I Sbjct: 16 LSLVFIFMWIF--YSFSILLLALIV-------------ICIFLFRTPKREL-VCSDEKAI 59 Query: 728 VSPVNGRVYKIEKNVDHEFFGKDMTSVLIQVPFWKEFGLFFPVKSEIHDVQASCDSCL-D 904 +P++GRV KIE N+ H+ G + + I+ + P I D++ L Sbjct: 60 FAPIDGRVTKIE-NIHHKDLG-ECVEITIKNALYDAGNFNTPFAMSIIDIRLRHGLFLCS 117 Query: 905 HLVKFRLVNGMDIGLAVGQNILRLAPQIMVLPGDRGKQKVN----------FGFLPMGGE 1054 L +++N LA + +A +I DR + N GFL + G Sbjct: 118 ELKSAKMMNERAFILAKVKENKTIALRIYAGSFDRKLKLDNISHDLKAGDRMGFL-INGS 176 Query: 1055 VRVFIPSALEVLINEKDEVVAG 1120 + + +P + I DE+ AG Sbjct: 177 ISLLLPKDTRIHIGLNDEIKAG 198
>gi|39938987|ref|NP_950753.1| conserved hypothetical protein [Onion yellows phytoplasma] gi|39722096|dbj|BAD04586.1| conserved hypothetical protein [Onion yellows phytoplasma] Length = 237 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPIY 168 + S+L++ NL + + L GPGSYTG R++ A++L + IP+Y Sbjct: 74 IESVLQENNLGLNNLDALIVGVGPGSYTGTRVAVLTAKMLSFNLQIPLY 122
>gi|40063234|gb|AAR38061.1| glycoprotease family protein [uncultured bacterium 577] Length = 223 Score = 37.0 bits (84), Expect = 0.71 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = +1 Query: 34 LLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVL 144 LL K L + ++ G+ AGPGS+TG+RI+ G+AQ L Sbjct: 45 LLAKSELTLAQLDGIAFGAGPGSFTGLRIACGVAQGL 81
>gi|34498907|ref|NP_903122.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] gi|34104756|gb|AAQ61113.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 223 Score = 36.6 bits (83), Expect = 0.93 Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPI 165 V LL + + + E+ G+ GPGS+TG+RI+ G+AQ L + D+P+ Sbjct: 42 VSRLLAEAGVALGELDGIVFGQGPGSFTGLRIACGIAQGLAYSADLPV 89
>gi|23002945|ref|ZP_00046616.1| COG2190: Phosphotransferase system IIA components [Lactobacillus gasseri] Length = 624 Score = 36.2 bits (82), Expect = 1.2 Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 18/199 (9%) Frame = +2 Query: 563 LPKWIYSCITFV--ALLLMLIIGVWGFLFAALVYGILFAIFRK-----QKEDFRKDSNEN 721 LP W+ FV A++++++ V F+ A V G + K QKE+F + ++ Sbjct: 414 LPMWVSKTENFVIQAIIVIIVASVATFI-ATWVIGFDDPVDEKSEKNKQKEEFEQTHEKH 472 Query: 722 VIVSPVNGRVYKIEKNVDHEFFGKDMTSVLIQVPFWKEFGLFFPVKSEIHDVQASCDSCL 901 + SPV G V + + D F M + VP E ++ P + V A+ D+ Sbjct: 473 DLKSPVKGTVEPLSEVNDETFASGVMGKGIAIVP--SEGKIYAP---DDGVVTATFDT-- 525 Query: 902 DHLVKFRLVNGMDIGLAVGQNILRLAPQIMVLPGDRGKQKVNFGFLPMGGEVRV------ 1063 H + L N D+ + +G + ++ + GD KQ V G G+ V Sbjct: 526 GHAIGLHLDNDADVLIHIGIDTVQ-------MNGDGFKQLVKKGDHVKAGQELVDFDIDK 578 Query: 1064 -----FIPSALEVLINEKD 1105 + P+ + +++N KD Sbjct: 579 IKKAGYDPTVMMIVLNSKD 597
>gi|15802220|ref|NP_288243.1| orf, hypothetical protein [Escherichia coli O157:H7 EDL933] gi|15831770|ref|NP_310543.1| hypothetical protein ECs2516 [Escherichia coli O157:H7] gi|24112805|ref|NP_707315.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30062939|ref|NP_837110.1| hypothetical protein S1536 [Shigella flexneri 2a str. 2457T] gi|25306255|pir||D90943 hypothetical protein ECs2516 [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) gi|25306280|pir||H85791 hypothetical protein yeaZ [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12515847|gb|AAG56796.1| orf, hypothetical protein [Escherichia coli O157:H7 EDL933] gi|13361983|dbj|BAB35939.1| hypothetical protein [Escherichia coli O157:H7] gi|24051737|gb|AAN43022.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30041188|gb|AAP16917.1| hypothetical protein S1536 [Shigella flexneri 2a str. 2457T] Length = 231 Score = 36.2 bits (82), Expect = 1.2 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 19/130 (14%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLE-WQDIPIYSFYHFSVPFIL 201 V +L + ++ L GPGS+TG+RI G+AQ L ++P+ V ++ Sbjct: 42 VQDILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPM-----IGVSTLM 96 Query: 202 GIERGAW----------VSKAFKGEIFLYE--------WRGEKVEKSLHSEKDLSSLQEK 327 + +GAW A GE++ E W GE+ E L E + E+ Sbjct: 97 TMAQGAWRKNGATRVLSAIDARMGEVYWAEYQRDENGIWHGEETEAVLKPE----LVHER 152 Query: 328 LSPELGEFWT 357 + GE+ T Sbjct: 153 MQQLSGEWVT 162
>gi|16129761|ref|NP_416321.1| hypothetical protein b1807 [Escherichia coli K12] gi|2829644|sp|P76256|YEAZ_ECOLI Hypothetical protease yeaZ gi|7430083|pir||G64941 hypothetical protein b1807 - Escherichia coli (strain K-12) gi|1736440|dbj|BAA15611.1| O-sialoglycoprotein endopeptidase (EC 3.4.24.57) (Glycoprotease). [Escherichia coli] gi|1736446|dbj|BAA15616.1| O-sialoglycoprotein endopeptidase (EC 3.4.24.57) (Glycoprotease). [Escherichia coli] gi|1788109|gb|AAC74877.1| orf, hypothetical protein [Escherichia coli K12] Length = 231 Score = 36.2 bits (82), Expect = 1.2 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 19/130 (14%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLE-WQDIPIYSFYHFSVPFIL 201 V +L + ++ L GPGS+TG+RI G+AQ L ++P+ V ++ Sbjct: 42 VQDILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPM-----IGVSTLM 96 Query: 202 GIERGAW----------VSKAFKGEIFLYE--------WRGEKVEKSLHSEKDLSSLQEK 327 + +GAW A GE++ E W GE+ E L E + E+ Sbjct: 97 TMAQGAWRKNGATRVLAAIDARMGEVYWAEYQRDENGIWHGEETEAVLKPE----IVHER 152 Query: 328 LSPELGEFWT 357 + GE+ T Sbjct: 153 MQQLSGEWVT 162
>gi|26248065|ref|NP_754105.1| Hypothetical protease yeaZ [Escherichia coli CFT073] gi|26108468|gb|AAN80670.1| Hypothetical protease yeaZ [Escherichia coli CFT073] Length = 231 Score = 36.2 bits (82), Expect = 1.2 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 19/130 (14%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLE-WQDIPIYSFYHFSVPFIL 201 V +L + ++ L GPGS+TG+RI G+AQ L ++P+ V ++ Sbjct: 42 VQDILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPM-----IGVSTLM 96 Query: 202 GIERGAW----------VSKAFKGEIFLYE--------WRGEKVEKSLHSEKDLSSLQEK 327 + +GAW A GE++ E W GE+ E L E + E+ Sbjct: 97 TMAQGAWRKNGATRVLAAIDARMGEVYWAEYQRDENGIWHGEETEAVLKPE----LVHER 152 Query: 328 LSPELGEFWT 357 + GE+ T Sbjct: 153 MQQLSGEWVT 162
>gi|16272336|ref|NP_438549.1| unknown protein [Haemophilus influenzae Rd KW20] gi|1175235|sp|P43990|YEAZ_HAEIN Probable protease HI0388 precursor gi|1074382|pir||H64006 hypothetical protein HI0388 - Haemophilus influenzae (strain Rd KW20) gi|1573358|gb|AAC22046.1| conserved hypothetical protein [Haemophilus influenzae Rd] Length = 236 Score = 36.2 bits (82), Expect = 1.2 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 5/149 (3%) Frame = +1 Query: 34 LLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEW-QDIPIYSFYHFSVPFILGIE 210 +L L + +V L GPGS+TG+R+ G+AQ L + D+P+ + + Sbjct: 48 ILANSGLGLNQVDALAFGRGPGSFTGVRVGAGIAQGLAFGADLPVIPISNLT-------- 99 Query: 211 RGAWVSKAFKGEIFLYEWRGEKVEKSLHSEKDLSSLQEKLSPELGEFWTHFDGVIDQISR 390 A AF E+ E ++ ++ ++EK+ + GEF+ + + +Q+ Sbjct: 100 --AMAQAAF--ELHQAENVVAAIDARMNEVYFSQVVREKVRSDFGEFFQWREIISEQVCS 155 Query: 391 SSAQLIKEKPEEVF----SYVAESQLREK 465 + + + + F + A SQ EK Sbjct: 156 PEQAINQLQNDNAFRVGTGWAAYSQFTEK 184
>gi|19075190|ref|NP_587690.1| hypothetical protein. [Schizosaccharomyces pombe] gi|7491939|pir||T41468 hypothetical protein SPCC613.02 - fission yeast (Schizosaccharomyces pombe) gi|3647330|emb|CAA21054.1| SPCC613.02 [Schizosaccharomyces pombe] Length = 497 Score = 36.2 bits (82), Expect = 1.2 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = +2 Query: 620 IGVWGFLFAALVYGILFAIFRKQKEDFRKDSNENVIVSPVNGRVYKIEKNVDHEF 784 +G W LFA +YGIL +IF K + R D N++ P N ++ + H+F Sbjct: 258 VGSWFMLFAWCIYGILLSIFFK---EIRADGNDSSARKPENFNGQAVKLSYTHKF 309
>gi|37526048|ref|NP_929392.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785478|emb|CAE14425.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 231 Score = 35.4 bits (80), Expect = 2.1 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 14/107 (13%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLE-WQDIPIYSFYHFS----- 186 V S+L + + ++++ L GPGS+TG+RI G+AQ L ++P+ + Sbjct: 44 VQSVLAEAGMSLQQLDALAFGRGPGSFTGVRIGVGIAQGLSLGAELPVIGVSTLNAMAQG 103 Query: 187 VPFILGIERGAWVSKAFKGEIF--------LYEWRGEKVEKSLHSEK 303 V +LG + A GE++ EW+G + E L E+ Sbjct: 104 VFRLLGATQVLTAIDARMGEVYWGQYIRNQQGEWQGRETEAVLKPEQ 150
>gi|16801248|ref|NP_471516.1| similar to glycoprotease [Listeria innocua] gi|25515251|pir||AD1705 glycoproteinase homolog lin2183 [imported] - Listeria innocua (strain Clip11262) gi|16414696|emb|CAC97412.1| lin2183 [Listeria innocua] Length = 230 Score = 35.4 bits (80), Expect = 2.1 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Frame = +1 Query: 31 SLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPI 165 +L+E+ +K +++ + GPGSYTG+RI +A+ + W IPI Sbjct: 44 ALMEECAVKPTDIEKIAVAKGPGSYTGLRIGVTVAKTMAWDAGIPI 89
>gi|24212739|ref|NP_710220.1| conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gi|24193376|gb|AAN47238.1| conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 231 Score = 35.4 bits (80), Expect = 2.1 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 12/82 (14%) Frame = +1 Query: 1 SSASIHSHVYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLE---------WQ 153 SS + + S+L+K N K ++ + GPGS+TG+RI+ A+ L + Sbjct: 46 SSKLLIQELKSVLQKSNWKTPDL--IISALGPGSFTGLRIAVATARNLSQLWKIPAIGFD 103 Query: 154 DIPIY-SFYHFSV--PFILGIE 210 + +Y SFY+ V P I+GIE Sbjct: 104 SLNVYTSFYYQEVGDPVIVGIE 125
>gi|23111907|ref|ZP_00097468.1| COG1214: Inactive homolog of metal-dependent proteases, putative molecular chaperone [Desulfitobacterium hafniense] Length = 238 Score = 35.4 bits (80), Expect = 2.1 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Frame = +1 Query: 34 LLEKRNLKIKEVQGLFQVAGPGSYTGMRI----SEGMAQVLEWQDIPIYSFYHFSVPFIL 201 +LE K++++ + V GPGS+TG+RI ++G+AQVL+ +P+ +L Sbjct: 46 VLEASAWKLQDLDFIGVVRGPGSFTGIRIGIATAQGLAQVLK---LPLIG--------VL 94 Query: 202 GIERGAWVSKAFKGEI 249 ++ AW + K EI Sbjct: 95 SLDSLAWAGHSRKEEI 110
>gi|16804116|ref|NP_465601.1| similar to glycoprotease [Listeria monocytogenes EGD-e] gi|25515539|pir||AE1334 glycoproteinse homolog lmo2077 [imported] - Listeria monocytogenes (strain EGD-e) gi|16411547|emb|CAD00155.1| lmo2077 [Listeria monocytogenes] Length = 230 Score = 35.0 bits (79), Expect = 2.7 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +1 Query: 34 LLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPI 165 L+E+ +K +++ + GPGSYTG+RI +A+ + W IPI Sbjct: 45 LMEECGVKPTDLEKIAVAKGPGSYTGLRIGVTVAKTMAWDAGIPI 89
>gi|33152534|ref|NP_873887.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] gi|33148758|gb|AAP96276.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 230 Score = 35.0 bits (79), Expect = 2.7 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVL 144 V LL + N+ IK+V L GPGS+TG+R+ +AQ L Sbjct: 44 VDELLSQANISIKQVDVLAFGRGPGSFTGVRVGVSVAQGL 83
>gi|13357872|ref|NP_078146.1| conserved hypothetical [Ureaplasma urealyticum] gi|11282619|pir||G82907 conserved hypothetical UU312 [imported] - Ureaplasma urealyticum gi|6899288|gb|AAF30721.1| conserved hypothetical [Ureaplasma urealyticum] Length = 191 Score = 35.0 bits (79), Expect = 2.7 Identities = 14/44 (31%), Positives = 30/44 (68%) Frame = +1 Query: 13 IHSHVYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVL 144 I H+ +LL+ NL+ ++++ ++ GPGS+TG+R+ +A+ + Sbjct: 42 IVEHLNNLLKITNLQYQDLEAIYLNTGPGSFTGIRVGAIVAKTI 85
>gi|19703690|ref|NP_603252.1| Phosphatidylserine decarboxylase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|32469636|sp|Q8RGF2|PSD_FUSNN Phosphatidylserine decarboxylase proenzyme [Contains: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain] gi|19713812|gb|AAL94551.1| Phosphatidylserine decarboxylase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 300 Score = 34.7 bits (78), Expect = 3.5 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 22/90 (24%) Frame = +2 Query: 677 FRKQKEDFRK-DSNENVIVSPVNGRV--YKIEKNVD-----------HEFFG-------- 790 +R+ K+ RK D NENVIVSP +G++ Y+ K VD EFF Sbjct: 95 YRELKDGARKIDYNENVIVSPADGKILAYQNIKEVDKFFVKGSKFTLEEFFNDKELAKKY 154 Query: 791 KDMTSVLIQVPFWKEFGLFFPVKSEIHDVQ 880 +D T V++++ FPV EI +++ Sbjct: 155 EDGTFVIVRLAPADYHRFHFPVDGEISEIK 184
>gi|15602574|ref|NP_245646.1| unknown [Pasteurella multocida] gi|12720997|gb|AAK02793.1| unknown [Pasteurella multocida] Length = 239 Score = 34.7 bits (78), Expect = 3.5 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +1 Query: 34 LLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLE-WQDIPI 165 +L + L +K+V L GPGS+TG+R+ G+AQ L D+P+ Sbjct: 48 ILCQSGLSLKQVDALAFGRGPGSFTGVRVGAGIAQGLALGADLPV 92
>gi|21283704|ref|NP_646792.1| ORFID:MW1975~hypothetical protein, similar to glycoprotein endopeptidase [Staphylococcus aureus subsp. aureus MW2] gi|21205146|dbj|BAB95840.1| MW1975 [Staphylococcus aureus subsp. aureus MW2] Length = 229 Score = 34.7 bits (78), Expect = 3.5 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = +1 Query: 4 SASIHSHVYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPIY 168 S + + L E+ + +++ + GPGSYTG+RI +A++L + D+ +Y Sbjct: 45 SVQLMPAISQLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAKILAYALDVKLY 100
>gi|23003734|ref|ZP_00047385.1| COG1214: Inactive homolog of metal-dependent proteases, putative molecular chaperone [Lactobacillus gasseri] Length = 241 Score = 34.3 bits (77), Expect = 4.6 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRI 120 + LL++ NL +K++ GPGSYTG+RI Sbjct: 42 INELLKENNLTLKDIDRFAVAEGPGSYTGLRI 73
>gi|15896094|ref|NP_349443.1| Inactive homolog of metal-dependent proteases. YDIC B.subtilis ortholog [Clostridium acetobutylicum] gi|25498384|pir||D97249 inactive homolog of metal-dependent proteases. YDIC B. subtilis ortholog [imported] - Clostridium acetobutylicum gi|15025883|gb|AAK80783.1| Inactive homolog of metal-dependent proteases. YDIC B.subtilis ortholog [Clostridium acetobutylicum] Length = 237 Score = 34.3 bits (77), Expect = 4.6 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = +1 Query: 4 SASIHSHVYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVL 144 S + S + +L NLK++++ G GPGS+TG+RI + + L Sbjct: 36 SVILMSMIDDMLNTVNLKVEDLDGFVVSKGPGSFTGLRIGMSIVKGL 82
>gi|34763769|ref|ZP_00144686.1| Phosphatidylserine decarboxylase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886463|gb|EAA23721.1| Phosphatidylserine decarboxylase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 300 Score = 34.3 bits (77), Expect = 4.6 Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 45/209 (21%) Frame = +2 Query: 677 FRKQKEDFRK-DSNENVIVSPVNGRV--YKIEKNVD-----------HEFFG-------- 790 +R+ K+ RK D NE+VIVSP +G++ Y+ K +D EFF Sbjct: 95 YRELKDGARKIDYNEDVIVSPADGKILAYQNIKEIDKFFVKGSEFTLEEFFNDKELSKKY 154 Query: 791 KDMTSVLIQVPFWKEFGLFFPVKSEIHDV-------------------QASCDSCLDHLV 913 +D T V+I++ FPV +I +V + C++ ++ + Sbjct: 155 EDGTCVIIRLAPADYHRFHFPVDGKISEVKRISGDYYSVSTHAIKTNFRIFCENKREYAI 214 Query: 914 ----KFRLVNGMDIGLAVGQNILRLAPQIMVLPGDRGKQKVNFGFLPMGGEVRVFIPSAL 1081 KF + DIG + I++ + +G++K G+ GG Sbjct: 215 LKTEKFGDIAMFDIGATMVGGIIQTYKANSFV--KKGEEK---GYFLFGGSTC------- 262 Query: 1082 EVLINEKDEVVAGQGILAGIPTDIEEK*Y 1168 +L+ EKD+VV + I+ IE + Y Sbjct: 263 -ILVFEKDKVVIDKDIIENTQNKIETRIY 290
>gi|21233244|ref|NP_639161.1| O-sialoglycoprotein endopeptidase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21115567|gb|AAM43490.1| O-sialoglycoprotein endopeptidase [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 354 Score = 34.3 bits (77), Expect = 4.6 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +1 Query: 37 LEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPIYSFYH 180 L++ L+I E+ G+ AGPG + + G+A+ L W ++P +H Sbjct: 67 LDEAGLRIDELDGVAYTAGPGLVGALLVGAGVARALAWALEVPAIGVHH 115
>gi|15613109|ref|NP_241412.1| glycoprotein endopeptidase [Bacillus halodurans] gi|25487786|pir||B83718 glycoprotein endopeptidase BH0546 [imported] - Bacillus halodurans (strain C-125) gi|10173159|dbj|BAB04265.1| glycoprotein endopeptidase [Bacillus halodurans] Length = 236 Score = 34.3 bits (77), Expect = 4.6 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPIYSFYHFSVPFIL 201 + SL+++ + E++ + GPGSYTG+RI A+ L W I + V Sbjct: 43 IESLMKEVGVAPNELERIVVAQGPGSYTGVRIGVTTAKTLAWSLGISLVGVSSLEVMAQH 102 Query: 202 GI---ERGAWVSKAFKGEIF--LYEWRGEKVE 282 G E + A +G+I+ Y W G++V+ Sbjct: 103 GYYAKELIVPLIDARRGQIYSGTYRWNGKEVD 134
>gi|1143292|gb|AAA92893.1| L2 capsid protein Length = 466 Score = 34.3 bits (77), Expect = 4.6 Identities = 11/52 (21%), Positives = 15/52 (28%), Gaps = 1/52 (1%) Frame = -2 Query: 1152 ISVGIXXXXXXXXXXXXXXXXXXSN-ADGMKTLTSPPIGRNPKFTFCFPLSP 1000 I VG ++ + +TS NP FT L P Sbjct: 115 IDVGAPAPIPRPPTTSGFDIATTADTTPAILDVTSVSTHENPTFTDPSVLQP 166
>gi|31544412|ref|NP_852990.1| conserved hypothetical [Mycoplasma gallisepticum R] gi|31541256|gb|AAP56558.1| conserved hypothetical [Mycoplasma gallisepticum R] Length = 226 Score = 34.3 bits (77), Expect = 4.6 Identities = 25/115 (21%), Positives = 56/115 (48%), Gaps = 2/115 (1%) Frame = +1 Query: 13 IHSHVYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQD--IPIYSFYHFS 186 I + + L +K+K ++ L+ GPGS++G+R+ +A+ + D + +Y+ + Sbjct: 79 IINKIEEFLADHKIKMKSIRKLYLTLGPGSFSGVRVGTNIAKTWKTVDPSLEVYTISNLK 138 Query: 187 VPFILGIERGAWVSKAFKGEIFLYEWRGEKVEKSLHSEKDLSSLQEKLSPELGEF 351 + G +K+ K + +Y RG + +++ +L +K +P+L F Sbjct: 139 IQVPYGEGISCIDAKSNKKYVSIY--RGNVGILKIVDDEEYENLCKK-NPDLSLF 190
>gi|9627116|ref|NP_041339.1| minor capsid protein [Human papillomavirus type 31] gi|138670|sp|P17389|VL2_HPV31 MINOR CAPSID PROTEIN L2 gi|73357|pir||P2WL31 L2 protein - human papillomavirus type 31 gi|459921|gb|AAA46955.1| minor capsid protein Length = 466 Score = 33.9 bits (76), Expect = 6.0 Identities = 10/52 (19%), Positives = 15/52 (28%), Gaps = 1/52 (1%) Frame = -2 Query: 1152 ISVGIXXXXXXXXXXXXXXXXXXSN-ADGMKTLTSPPIGRNPKFTFCFPLSP 1000 + VG ++ + +TS NP FT L P Sbjct: 115 VDVGAPAPIPHPPTTSGFDIATTADTTPAILDVTSVSTHENPTFTDPSVLQP 166
>gi|22985248|ref|ZP_00030372.1| COG1214: Inactive homolog of metal-dependent proteases, putative molecular chaperone [Burkholderia fungorum] Length = 298 Score = 33.9 bits (76), Expect = 6.0 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = +1 Query: 1 SSASIHSHVYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVL 144 SS + + L ++ LK+ + + +GPGS+TG+R + G+AQ L Sbjct: 86 SSTRLLPAIRELFDEAGLKLADCDAIAFGSGPGSFTGLRTATGVAQGL 133
>gi|21244595|ref|NP_644177.1| O-sialoglycoprotein endopeptidase [Xanthomonas axonopodis pv. citri str. 306] gi|21110274|gb|AAM38713.1| O-sialoglycoprotein endopeptidase [Xanthomonas axonopodis pv. citri str. 306] Length = 352 Score = 33.5 bits (75), Expect = 7.9 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +1 Query: 37 LEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEWQ-DIPIYSFYH 180 L + L+I E+ G+ AGPG + + G+A+ L W D+P +H Sbjct: 67 LGEAGLRIDELDGVAYTAGPGLVGALLVGAGVARSLAWALDVPAIGVHH 115
>gi|15641991|ref|NP_231623.1| conserved hypothetical protein [Vibrio cholerae O1 biovar eltor str. N16961] gi|11278854|pir||D82133 conserved hypothetical protein VC1989 [imported] - Vibrio cholerae (strain N16961 serogroup O1) gi|9656530|gb|AAF95137.1| conserved hypothetical protein [Vibrio cholerae O1 biovar eltor str. N16961] Length = 237 Score = 33.5 bits (75), Expect = 7.9 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%) Frame = +1 Query: 25 VYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQVLEW-QDIPI 165 V +L++ + ++E+ L GPGS+TG+RI G+AQ L + D+P+ Sbjct: 44 VDEVLKEAGVTLQELDALAFGRGPGSFTGVRIGIGIAQGLAFGADLPM 91
>gi|12045060|ref|NP_072870.1| conserved hypothetical protein [Mycoplasma genitalium] gi|1351509|sp|P47450|Y208_MYCGE Hypothetical protein MG208 gi|1361635|pir||I64222 conserved hypothetical protein - Mycoplasma genitalium gi|3844806|gb|AAC71426.1| conserved hypothetical protein [Mycoplasma genitalium] Length = 196 Score = 33.5 bits (75), Expect = 7.9 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Frame = +1 Query: 22 HVYSLLEKRNLKIKEVQGLFQVAGPGSYTGMRISEGMAQ--VLEWQDIPIYSF--YHFSV 189 ++ ++L K LK ++ + GPGS+TG RI+ +A+ L + +Y+ F + Sbjct: 49 YLETMLTKNKLKKSSIKQFYVTIGPGSFTGQRIATIIAKSWCLLYPSCELYALNSLRFQI 108 Query: 190 PFILGIER 213 P+ GI + Sbjct: 109 PYEHGISK 116
>gi|21634569|gb|AAM69416.1| maturase K [Euryops virgineus] Length = 389 Score = 33.5 bits (75), Expect = 7.9 Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 10/128 (7%) Frame = +1 Query: 157 IPIYSFYHFSVPFILGIERGAWVSKAFKGEIFLYE--------WRGEKVEKSLHSEKDLS 312 + +Y+FY + P ++ +AF+ +L++ ++G KS+ + K Sbjct: 237 VTLYTFYVRTTPS----DQAPIFDRAFQANFWLFKDPFMHCVRYQG----KSIIASKGTF 288 Query: 313 SLQEKLSPELGEFWTHFDGVIDQISRSSAQLIKEKPEEVFSYVAESQLREKPFYYRS--L 486 L K P G FW ++ + Q R + + Y S +R KP RS L Sbjct: 289 LLMNKWKPYFGNFWKYYFYLWSQPGRIYINQLSNHSLDFLGY--RSSVRLKPLMVRSQML 346 Query: 487 ENEFHVSN 510 EN F + N Sbjct: 347 ENAFIIDN 354
>gi|30249301|ref|NP_841371.1| psd, phosphatidylserine decarboxylase [Nitrosomonas europaea ATCC 19718] gi|32469622|sp|Q82UZ4|PSD_NITEU Phosphatidylserine decarboxylase proenzyme [Contains: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain] gi|30180620|emb|CAD85233.1| psd, phosphatidylserine decarboxylase [Nitrosomonas europaea ATCC 19718] Length = 216 Score = 33.5 bits (75), Expect = 7.9 Identities = 44/193 (22%), Positives = 78/193 (40%), Gaps = 13/193 (6%) Frame = +2 Query: 596 VALLLMLIIG-VWGFLFAALVYGILFAIFRKQKEDFRKDSNENVIVSPVNGRVYKIEKNV 772 VALL+ + G +W F + +L FR + +++P +GR+ ++K V Sbjct: 25 VALLVQFMAGWLWALPFWLIALFVL-QFFRDPPRVV--PALAGAVLAPADGRIVAVDK-V 80 Query: 773 DHEFFGKDMTSVLIQVPFWKEFGLFFPVKSEIHDVQASCDSCLD-HLVKFRLVN------ 931 + ++ V + + + PV EI + + L+ L K L N Sbjct: 81 QDPYLPREALKVSVFMNVFNVHSNRSPVDGEIRNRWYFPGNFLNASLPKASLENERNALW 140 Query: 932 -----GMDIGLAVGQNILRLAPQIMVLPGDRGKQKVNFGFLPMGGEVRVFIPSALEVLIN 1096 G D+ ++ V PG+ + FGF+ G V V++P +V + Sbjct: 141 IRTDGGQDVTCVQIAGLIAKRIVCHVHPGEHLARGQRFGFIRFGSRVDVYLPLGTKVNVA 200 Query: 1097 EKDEVVAGQGILA 1135 D+V A Q +LA Sbjct: 201 IGDKVYATQTVLA 213
>gi|28828134|gb|AAO50817.1| similar to reverse transcriptase [Caenorhabditis elegans] [Dictyostelium discoideum] Length = 786 Score = 33.5 bits (75), Expect = 7.9 Identities = 21/84 (25%), Positives = 28/84 (33%), Gaps = 1/84 (1%) Frame = -2 Query: 1155 SISVGIXXXXXXXXXXXXXXXXXXSNADGMKTLTSPPIGRNPKFTFCFPLSPGKTII*GA 976 ++S S A T T PP+ NP TF F I Sbjct: 70 AVSTTSPPVTANPFATFSFSKPAASPAIATSTTTIPPVSTNPFATFSFSKPAASPAI--- 126 Query: 975 KRNIFCPTARPISI-PFTSLNFTK 907 T+ P+S PF S +F+K Sbjct: 127 --ATSTTTSPPVSTNPFASFSFSK 148
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Jan 12, 2004 2:58 AM Number of letters in database: 527,787,770 Number of sequences in database: 1,604,661 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 209,481,009 Number of Sequences: 1604661 Number of extensions: 4335623 Number of successful extensions: 10759 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10324 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10753 length of database: 527,787,770 effective HSP length: 127 effective length of database: 323,995,823 effective search space used: 86182888918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
